Oncorhynchus gorbuscha (pink salmon): 124015562
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Entry
124015562 CDS
T07892
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124015562
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124015562
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
124015562
NCBI-ProteinID:
XP_046186818
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All DBs
Position
LG26:4840204..4877216
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AA seq
476 aa
AA seq
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MLMSNDVTSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAALRGMKRGDPASDAQTSA
ALVESAGAECKRPRIDASGVVAEVGQNNDPLTLGYHGYPTHSQGSQDAGGGQEGLVPPSF
SAFPPPPPPPPQNGLALEYGASLYAAGAIQGSVEAGQAGLNTPTSVPNSLTTHQSDVSSQ
IDTQLVCTGGGGGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGE
GLAALPYGLLNANSPTAGWKLSPMVGAMYSPELYTDFSGLSLSVPGFPYPAAAATAAATF
RGAHLRGRGRPVYSAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTAVAG
PAGAAAAAAAAYSDGYGRVYTTDPYHAALNPATAAAYGVGAMATLYRGGYSRFAPY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaacgacgtaacatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcatcccaactcgaccggggcttct
ggcgcagctctccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcggca
gctcttgtggaatcggccggggcagagtgcaagcgtccccggattgacgcatctggagta
gtcgcagaggtcggccagaacaatgaccccctgacccttggttaccatggatacccaacc
cacagtcagggctctcaggatgcaggaggtggtcaagagggtctcgtccccccatccttc
tccgccttcccccctcctccccctccacccccccagaacggcttggccctggagtacggg
gccagtctgtatgccgcaggggccatccaggggtcggtggaggccggacaggcaggcctt
aacaccccgacaagtgtcccgaacagcttaaccacgcatcagtcagatgtgtcgtcacag
attgatacccagttggtgtgtacaggaggaggtggtggcggggggtccgtaggtgacgac
tcagagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagac
cctgacctccggcagatgtttgggcaatttggaaagatcctcgacgtagagatcatattc
aacgagagaggatcgaagggttttggctttgtgacgtttgagacaagcgcagacgctgag
aaggccagagctgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaac
gccacagccagggtgatgaccaataagaaaatggtcaccccatattctaatggaggagag
gggctcgccgctctaccttatgggctattaaatgccaactcccctacagccgggtggaag
ttgagtccaatggttggagccatgtacagtccagagctctatacagatttctctggcctg
tctctctcagtccctggcttcccgtaccctgcggcggctgccacagcggcagcgaccttt
aggggcgcccacctccggggtcgtggccggccagtctacagtgctgtcagggcagcccta
ccccagcaagctatacctacatacccaggtgtgatgtatcaggaagggttttacggtgca
gcagacctctatggtggctatgctgcgtatcgctacgctcagccgactgcggtagctggt
cctgcaggagcagcggctgccgcagcagctgcctacagtgatggctacggacgggtgtac
acgacagacccttaccacgctgcactaaaccctgccacagctgcagcctacggtgtagga
gctatggccacactgtacaggggaggctacagtagatttgcgccctactaa
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