Oncorhynchus gorbuscha (pink salmon): 124016008
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Entry
124016008 CDS
T07892
Name
(RefSeq) chondroitin sulfate synthase 2-like
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ogo01100
Metabolic pathways
Module
ogo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124016008
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124016008
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124016008
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124016008
Glycosyltransferases [BR:
ogo01003
]
Glycan extension
O-Glycan
124016008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
124016008
NCBI-ProteinID:
XP_046187510
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All DBs
Position
LG01:complement(74909396..74920844)
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AA seq
766 aa
AA seq
DB search
MRFSMFISLLRPIGPVIIGISLGFTLSLLSVNWVEESCFLNGKASEQISLSQDGNSKGAT
RPNSISTVKDVDAEEDFEPRIVPYKPVQQSKPNKLFRAKYISTELGIRERLFVGILTSKS
TINTLGVAVNRTLSHHLDTVVFFTGMRNRKVPHGMFVVTHGDERLIWNMFQTIKYILEHY
VHEYDWFYLAQDDTYTEADRIKQLVAHLSMDRELYMGSPEEFIGGEMEGRYCYGGFGYIL
SRTLLLRLKPFLENCRNDILSARPDEWLGRCIIDYANTNCVDEHEGLQYYHYEMGKNSDP
SKEDNMQFKNALTVHPVSDPEQMYRLHKHFTEVELQRTYDEIEKLQTEIKNVSEVAYDGN
RSAQWPIGINPPFEPKSRFEVLRWDYFTEEQVYSCIDGFPKCELRGIDRLDVADVIEIAM
GELNKKYKPVLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGHSSSITKRVHLVRP
LSRIEIIPMPYVTEATRVHIILPLNVQDRDYVNHFLEVLAANSFETSENAILTFLFIYDP
FEAQQVNQNDIFASVKTQINAYERKYPTVKIPWISVKTETPSQIKFMDIISKKHPVDTLF
FITNVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDYNPDIAFHNQEPPPAVDLVKDAGHF
DRSSFEEACFYNIDYMATRTRMASDVQENEEILETLDIYDMFVRYSTLHVFRAVEPGLHQ
KYHYQACNPRLSEDIYHRCVQSNLDGLGARSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattctcaatgtttatttctctgctgaggccgatcgggccggttattatcggtatt
tctttgggctttaccttaagtttacttagtgtgaattgggtggaggaatcttgtttcctc
aacgggaaagcgagtgaacaaataagtttgtcccaagatgggaattcaaaaggagcaacg
agacccaattcgatatcgacggtcaaagatgtggacgccgaggaagattttgagccaaga
atagtgccatataaaccagtccaacaaagcaaaccaaataaactttttcgggcgaagtac
atcagtacagagctggggatccgggagcgcctcttcgtcgggatcctgacgtccaaaagc
accatcaacacattgggagtggccgtgaaccgcaccctcagccaccacctggacactgtc
gtcttcttcaccggcatgcgcaaccgcaaagtgccccacggcatgttcgtggtcacccat
ggggacgaaaggctcatatggaacatgttccagaccatcaagtacatcttggagcactat
gtccatgagtatgactggttctatctggcccaggacgacacctacaccgaggcagaccgg
atcaaacagctggtggctcacctgagcatggaccgggagctttacatgggcagccccgag
gagtttataggtggggagatggaggggaggtactgctatggtgggttcggatacattctc
tcccgtaccctgttgctccggctcaaacccttccttgagaactgtaggaatgacatcctg
agcgccaggcctgacgagtggctgggcagatgcatcattgattatgccaacaccaactgt
gtggatgagcatgaggggctgcagtactaccattacgaaatgggcaagaactcagatccg
agtaaggaggacaatatgcagtttaaaaatgccttgactgtccacccggtgtctgaccct
gagcagatgtatagactacacaagcacttcactgaggtcgaactccagaggacatacgat
gaaattgagaagctgcagacggagataaagaatgtgagtgaagtggcttatgatggcaac
cggagcgcccagtggcccattgggatcaatcctccctttgagcccaagtcccgcttcgag
gtccttcgatgggactacttcacggaggaacaggtgtattcgtgcatcgacggcttcccc
aagtgtgaactgcgcggtattgatcgtttggacgtggccgacgtcatcgagatagccatg
ggggagctgaacaagaagtacaagcctgtcctccacttgaagaagcagcagctgatcaat
ggctaccggcgcttcgaccccactcggggcatggagtacaccctggacctacagctggag
gtagtcaaccagaaaggtcacagtagctccatcaccaagagggtccacctggtgcgtccc
ctgagtcgcatcgagatcatccccatgccttatgtcacagaggccaccagagttcacatc
atcttaccgctgaacgttcaggatcgagattacgtcaaccattttcttgaagtgttggcc
gcaaattcgtttgagaccagtgaaaacgccatcttgactttcctgttcatctacgaccca
ttcgaggcccagcaggtcaaccagaatgacatcttcgccagtgttaaaacccagatcaat
gcctacgaacgcaagtatccaacagtgaagatcccgtggataagtgtcaagaccgaaacc
ccctctcaaatcaaattcatggacatcatctcgaagaagcacccagtagacactctgttc
ttcatcactaacgtcaacaccaacgtcaactcagagttcctcaaccgttgccgcatgaac
tccatcaacaactggcaggtgttcttcccaatccacttccaggactacaacccagacatt
gccttccataaccaggagcccccacccgcagtagacctggtcaaggacgccggacacttt
gaccgcagttcgttcgaggaggcgtgcttctacaacattgactacatggcgacgcgcaca
cgcatggcctccgacgtgcaggagaacgaggagatcctggagaccttggatatctacgat
atgtttgtcaggtactcaaccctgcatgtgttcagggctgtggagccaggcttgcaccag
aagtaccactaccaggcttgtaaccctcggctcagtgaggacatctaccacaggtgtgtc
cagagcaacctggatggcctgggagcccgttcccagctcgccatgctgttatttgaacaa
gagcaaggaaatagcacttga
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