Oncorhynchus gorbuscha (pink salmon): 124035564
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Entry
124035564 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04217
Necroptosis
ogo04622
RIG-I-like receptor signaling pathway
ogo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124035564
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124035564
04625 C-type lectin receptor signaling pathway
124035564
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124035564
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124035564
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124035564
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C67
124035564
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124035564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
124035564
NCBI-ProteinID:
XP_046205002
LinkDB
All DBs
Position
LG05:complement(16288036..16321798)
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AA seq
961 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSIRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVTLVEEEMDFHQLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVDH
PVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNEATPPTRAPPSASLSNDNKFHSLPFSLSR
KTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSPTPPSPQPPSPPSSRGGGGVPGLEVGSL
VEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFVK
LKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGIQ
GHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVC
ATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFY
QIFMDKKDKVGVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLEL
DITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRH
GKLSVPKELQEGVWRQGSYPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADRD
GGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLY
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtggcggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccctgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaagggcaagaggagcatacgcatcctggaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaaccgttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccaaggccgg
cagctgttccgctgtgaggatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcaccctggtggag
gaggagatggatttccatcagctggagatcaactccagggtccttgtccagaccagagag
gggccggagagaggaaccataatcttctgtgacctgctgcctgggaacgagagcctgggg
tattatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtttggaacacacccgtctagtccccatctgtgacgta
atgccagagtactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctctggccaaagcaaaccaaagagcaaaggcttaggtcttcag
tgtgggagtagaagcaagtcagagttgtattatactttaaatggcagctctgttgaccac
ccagtccaggccaaatccaaaagcacatggtacattgatgaagtcggggaggaccctgcc
aagtccctcacagacacgccccctgacttcaatgaagccacacctcctaccagggccccg
ccctctgcttccttgtccaatgacaacaagttccattccctgcccttcagcctgagccgt
aagacggggcccaatggcagcatgagccatggacccctctccctctccgtgcagtcagtg
atgggagagcagatgcagatgccagagcccccatcccctacccctccctctccgcagccc
ccctcacctcccagctctcgcgggggtgggggagtgcctggtctggaggtggggtccctg
gtggaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtgggcctgccccca
ggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtacagac
ggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctgtttgtgaag
ctgaaatgctgccgtccggactcccgtttcccctccctacaccactcctccaaccccatc
gagagatgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaacact
cctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatccag
ggacactacaactcctgctacctggactccacactcttctgcctgttttccttcagctca
gtcctggacacagttctgctgaggccgaggtccaagactgacgtagagtattaccgagag
acacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtgtgt
gccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcagggttc
acgtctgaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattgagg
gtggaccccttactcaagctgaggtcggcaggtcagaaggttcaggactgctacttctac
cagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcttagag
tggtccttcatcaacagtgacctcaagtttgctgaggctccttcctgccttatcatccag
atgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactggagtta
gacatcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctggct
ctgtatgaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaacag
ttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgccac
ggcaagttgtccgtccccaaggaactgcaggagggtgtgtggcggcagggtagctaccct
cgtcagcggatggagctgttcgccgtgctctgcatagagaccagtcactacgtagcgttc
gtcaagtacggccaccaagactccgcatggctcttcttcgacagtatggccgaccgcgac
ggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcctat
ctgaagatgaccccagaggagctgcacgccctggaccccaagagcatccagggccaggcc
cgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctgtac
aagtag
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integrated database retrieval system
