Oncorhynchus gorbuscha (pink salmon): 124036165
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Entry
124036165 CDS
T07892
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124036165
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
V-set
ig
LRRNT
Ig_2
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
124036165
NCBI-ProteinID:
XP_046206334
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Position
LG01:32220767..32225828
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AA seq
685 aa
AA seq
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MSTVGRVSLQPTWNAALLALLALTMVPALSVCQPAGLGPPPNPQNCPVVCSCTNQIGKVV
CTRRGLVRVPPGIPTNTRYLNLMENSIETIQADTFRHLHHLEVLQLGRNAIRQIEVGAFN
GLTSLNTLELFDNRLTGIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRRLEYISDGAFEGLQNLKYLNLGMCNLREMPVLSPLTGLEELEMSENTFPEMKPGSFRG
LRSLQKLWIMNSGITVIERNAFDDITALVELNLAHNNLSSLPHDLFAPLQYLVELHLHHN
PWRCDCDVVWLSWWLREYIPTNSTCCGRCHSPAHMRGRYLVEVDQTTFQCSAPFILDAPR
DLNISAERVAELKCLTAAMSSVRWLLPNGTVLTHGSSHPRISVLNDGTLNFSNVLPSDKG
VYTCMVTNMAGNSNASAYLNVSNAELNTSNLSYFTTVTVEVLEPTVEETPKPKPTVPASP
SVFQPVFISTPTMLLQSTQTPRQVSLPTARGPTHPSASLDEVVKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKRHQQRSTVAVARTIEIIQMDEDVPEVPPARSGSSESEEMGLALPTILK
ARYISSSSSSSHRDRDRDRDKDRDRDRDRAAYGAHWTHNNLGNSLHRSSSRQHHQQHHHS
LISTIAEPYVIKTTHTKEMVQETQI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtgggccgggtttctctgcagcccacctggaacgcagccctgctcgccctg
ctagccctcaccatggtgccagctctcagtgtgtgccagcctgccggcctgggtccgccc
cccaacccccagaactgtccggtggtgtgctcctgcacaaaccagatcggtaaggttgtg
tgtacacgccgtggcctggtcagggttccccccgggatccccaccaacaccaggtacctc
aacctgatggagaacagcatcgagaccatccaggctgacaccttcagacacctacaccat
ctggaggtgctgcagctgggcaggaacgccatcaggcagattgaggtgggggccttcaat
ggcctgaccagcctcaacaccctggagctgtttgacaacagactgacggggatccccagc
ggggcctttgagtacctgtccaagctgagggagctgtggctgaggaacaaccccatcgag
agcatcccctcctatgccttcaacagggtgccctctctgatgaggctggacctaggggag
ctcaggaggctagagtacatttctgacggggcctttgagggcctgcagaacctcaagtac
ctgaacctaggaatgtgtaacctcagggagatgcctgtcctgtctcccctgactggcctg
gaggagctggagatgtctgagaacactttccctgagatgaagcctggctctttccgcggc
ctgcgctcgctacagaaactctggattatgaactctgggatcaccgtgatcgagaggaac
gccttcgatgacatcacagcactggtggagctgaatctagcccataataacctgtcatct
ctcccccacgacctctttgccccgctgcaatacctagtggagctacatctccaccacaac
ccctggaggtgtgactgtgacgtggtctggctgtcctggtggctcagggagtacatcccc
actaactccacctgctgcggccgctgccactcccctgcccacatgagaggacgatacctg
gtggaggtggaccagaccacattccagtgctctgctcccttcatcctggatgctccaagg
gacctcaacatctctgcagagagagtggctgagctcaagtgtcttacggccgccatgtca
tcggtccgatggctgcttcctaatgggaccgttctgacccacggctcgtctcaccctcgg
atctctgtcctcaatgatggaacgctcaacttctccaatgttttgccatcggacaagggt
gtctatacttgcatggtgactaacatggcaggtaactccaacgcctcagcctacctgaat
gtcagcaatgctgagctcaacacctccaacctgtcctatttcactacagtgactgtggag
gtgctggagcccactgtagaagagacccccaaacccaaacccacagtcccagcctcgccc
tcagtgttccagcctgtcttcatctccacgcccaccatgctgctccagagcacccagacc
ccccgccaggtgtctctccccacagcccgtggccccacccacccctccgccagcctggac
gaggtcgtgaagacaaccaagatcatcattggctgcttcgttgccgtgacgctccttgcc
gctgccatgttgatcgccttctacaagctgcgtaagcggcaccagcagcggagtacggtg
gcagtggctcggaccattgagataatccaaatggatgaggacgttcccgaggttccccca
gccaggtcaggttctagcgagtctgaggagatggggctggctctgcccaccatcttaaaa
gcaagatacatctcatcatcctcatcgtcctcccacagagacagagacagagacagagac
aaagacagagacagagacagggacagagctgcctacggggctcactggacccataacaac
ctgggaaactccctgcaccgttcctccagccgccagcatcatcagcagcaccaccacagc
ctcatcagcaccatcgcagagccctacgtcattaagaccactcacaccaaggagatggtc
caggagacccagatctaa
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