Oncorhynchus gorbuscha (pink salmon): 124039575
Help
Entry
124039575 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124039575
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124039575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
CCDC22_CC
COG2_C
DUF4239
Exonuc_VII_L
V_ATPase_I
UPF0239
EH_Signature
Tli4_N
LMBR1
Motif
Other DBs
NCBI-GeneID:
124039575
NCBI-ProteinID:
XP_046211647
LinkDB
All DBs
Position
LG01:51949534..51959073
Genome browser
AA seq
552 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHSYCWRCIEDCWDKNVLKGVYSCPQCRQT
FTPRPTLRKNNMLAEVVEKLKKTVLQAATPPTLCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQPHYEVPAFKKHKLIKATARLQEKICSHHDKLLEFYCRTHQQCICMLCVM
DVHKGHDTVSAAAERTEKQKQLGMSQQKVQQRVQKREKELKELQQAVESLKHSAQAAVED
TEKIFTQLIRSIERRCSEVKELIRAQEKAQASQAEGLLEQLKQEIAELRKRNAVCDQLSH
TEDHIHFLQSYQSLSSPSVSSDLPSITVRPLQYFGYVSKTVSELREKLEYFLKREWTKIS
TTVDVLPTEPKNREQFLQYSCQLTLDPNTACEELFLTEGKRKVTFTDQAQSYPNHPDRFT
NYYQVLCREGLSGCCYWEVEWSGHWVHTAVSYKDISRTRAGHAFGSNDKSWSLGCSTGGY
RFIHNNVVTNVPGPWSSRVGVYLDHKAGTLSFYSISDTMTLLHKVHTTFPQPLYPGFRLY
GANDTAELCKLW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaaggagttctcctggatcaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccagtcactactgcctgtggacacagttactgttggaggtgtattgag
gactgctgggataagaatgttctgaaaggggtctatagctgtccccagtgcagacagacc
ttcactccaagacctactctgaggaaaaataacatgttggctgaggtagttgagaaactg
aagaagacagtactccaggctgctacccctcctactctgtgctacgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtttggcctcttactgtgagactcacctccaacctcactatgaagttcctgcctttaag
aagcacaaattgattaaagccacagctcgactacaggagaagatctgctctcatcatgac
aaactgctggagttttactgtcgtacacatcagcagtgtatctgtatgctgtgtgtgatg
gatgtacataaaggccatgatacagtgtcagctgcagcagagagaactgagaaacagaag
caactggggatgagtcagcagaaggtccagcagagagtccagaagagagagaaggagttg
aaggagctccaacaggctgtggagtctctcaagcactctgcacaggcagcagtggaggac
actgagaagatctttactcagctgatccgctccattgagagaagatgctccgaagtgaag
gagctgatcagagcccaagagaaggctcaagcgagtcaagctgaaggacttctggagcaa
ctgaagcaggagatagctgagctgaggaagagaaacgctgtgtgtgaccagctctcacac
acagaggaccacatccatttcctgcagagttatcagtctctctccagtcccagtgtttct
tcagacttacccagcatcactgtccgtcctcttcagtactttggatatgtgagtaagact
gtgtctgagctgagagagaaactagaatacttccttaaaagagaatggaccaagatctca
actacagtggatgttttgcctacagagcccaagaacagagaacagttcttacaatattcc
tgtcagctcacactggacccaaacacagcatgtgaagaactctttctgactgaagggaag
agaaaggtcacctttacagatcaagcccaatcatatcctaaccatccagacagattcacc
aactactaccaggttctgtgtagagagggtctgtctggatgctgttactgggaggtggag
tggagtgggcactgggttcatacagcagtctcatataaagacatcagcagaacaagggca
ggtcatgcattcggatccaatgacaagtcctggagtttagggtgctctacgggtggttat
cgtttcatacacaataatgttgtgaccaatgtaccgggcccttggtcctccagagtggga
gtgtacctggatcacaaggcaggtactctgtccttctacagcatctctgacacaatgacc
ctcctccacaaagtccacaccacatttcctcagcccctctatcctgggtttcgtctctat
ggagctaatgatactgctgaactgtgtaaactgtggtag
DBGET
integrated database retrieval system
