Oncorhynchus gorbuscha (pink salmon): 124041244
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Entry
124041244 CDS
T07892
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124041244
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Others
Others
124041244
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
124041244
NCBI-ProteinID:
XP_046214563
LinkDB
All DBs
Position
LG08:15119466..15173035
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AA seq
1271 aa
AA seq
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METTVGCCPHWLIAMWMCLFTLTSTVDMTKTNIRCIPSSQLSVIKPAVRELSKVEFDPFG
KGPEDEAVGVAEKSPGCHPFKSSCKKANVEEYLARVSGDGEARSSVPESEQPFVNKSHSR
GLEERRLVDNSEVLYQHQSGSGITSKLTDRPMPPPATLNKVTVNNTRHNTFNSFGRENRL
KRHELSKKKAGASLRNLRRRRKRSFQTAESKTSWSGFGWNGEDASTPGQHELKLSSSTFA
LTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGTRYEKLDEKVGP
KTILSYLYVSPNNKRKIMLLTDPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDW
ILAYSHDQKLYVSVEFGRRWQLVHDSVVPNRFYWSKLGLDKEPGMIHLETSVSDRRSQYI
TCKLQNCTEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPK
YTFPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEAHGLFFTLALENVVSSGGPEGNVM
IDLYEVAGIKGVFLSNKVVENEVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLH
LNLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTANNVSIFITSDAGNTWREVFEEEY
SILFLNQGGALVAIRHTPLPIRHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIM
TIFGHFSHRSEWQLVKIDFRPIFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDAR
CVKTKDQYISQMSDSCPCTEADFECDFGFERQSDGGCTAAFWFVPSSVSKDCTTGDSFLN
TTGYRKALSNNCTAGTLGKYRLRRQRCPHQAPRGLQLVTSEGTLTATLGDNVTLLVFLEE
GDGSTTSITVDFGDGTAISYTNISSIEDGVKHTYSKVGIYQVAATALNSLGSERVLLYLH
VTCTLEQVQLSAPSVVVRNKAVDLSTVLKPRYVGTVTYYWWFTNHTEPVVTLVGGMSFTF
YKEGTHTVTVQVSAGNTVLQDKITVAVYEYFRSHVLAFSSNLDAFNPAVAEWRQDISRVV
KDSMVQVTGINGEQLLVSVLPGLPTAAELFIIPEKRPTEGTMNRKGTHLEQLSQVLLSAL
NQDLIQFTLRPGVQVNVYPTRLSPAPLVDTSESGHNGAAVIMLVSVVFVGLAVFVIFKFK
RKIPGINIYTEERSEKQQEVIPTVASIAVPNTEGDMVTSLEHLDTGPDARGIGYLPSLTD
IKLSDETPHVF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccgtcggttgctgccctcattggctcattgctatgtggatgtgtcttttt
accttaacttccacggtggacatgacaaaaacaaatataaggtgcattccatcaagccaa
ctctctgttatcaagccggctgtccgggaactctcgaaagtggaatttgatccatttgga
aagggaccagaggatgaagctgtgggggttgcagagaagtcaccaggttgtcaccccttt
aaaagcagctgtaaaaaagccaatgttgaggaatatttagcgcgcgtctccggtgatggc
gaggcaagaagttcagtccctgaatccgagcaaccgtttgtaaataaatcacacagccgt
ggattagaagaacgtcggctcgtggacaattctgaagtgctctatcaacatcaaagtggc
tcgggcatcacctccaaactcacagataggcctatgccgccacctgccaccctcaataaa
gtaaccgtcaataacactagacataatacatttaatagttttggaagagaaaatagactt
aaacgacatgagttatcaaaaaagaaggctggggcaagtttgaggaaccttcgccgtcga
cgaaagcgcagcttccaaacggcggagagcaaaacatcttggtccggattcggatggaac
ggtgaagatgcgtcaacccccgggcaacatgagttgaaacttagtagttctacattcgca
ctcacgggggattcagctcataaccaagccatggtgcattggtccggccaaaatagcagc
gtgattctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctct
ctatggaggtcaacagactatggaaccaggtatgagaaacttgatgaaaaggttgggcca
aaaaccatactaagctacttgtacgtgagtccgaataacaaacgaaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcag
aggtaccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactgg
atcctggcttacagccacgaccagaagctctacgtctctgttgaatttggaagacgatgg
cagctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggac
aaagaaccaggaatgattcacttggagacaagtgtttctgacagacgatcccagtatata
acatgtaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggtttatc
agcccggattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggc
cggcctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaag
tacacatttccaaaggacttgcagataatcagcacggatgataaccaggtggtggcagca
gtgcaggattggcaccagaatgactcctacaacttgtacatgtcagaggcccacggtctc
ttcttcactctggccctggagaacgtagtgagcagtgggggaccagagggcaacgttatg
atagacctctatgaggtcgcagggataaaaggggtgttcttgtcgaataaagttgtcgag
aacgaagtgaaaacatttatcacttacaataaggggcgagactggcgtcttctacatgct
cctaccactgatctgagcggtaccagactctactgtgtacagccctattgttcattgcac
ctgaatctccatgtgtctgacaacccgtacacgtctggaaacatagtcagtaaagaatca
gctccaggaattatagtagcatcaggtaccattgggcctgagctgaccgccaataatgtc
agcattttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtat
agcatcctctttcttaaccagggcggtgccctagtggccattcgacacacacctctcccc
atcagacacatttggttgagttttgatgagggaagacactggaacaaattcagctttacc
tcctctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatg
acaatatttggccatttcagccatcgttctgaatggcagcttgtcaagattgacttcagg
cccatcttcaacagaaggtgcaccacagatgactatcagacctggcagttacacaatgat
ggtaaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccaga
tgtgtcaaaaccaaagatcagtacatctcacagatgtcagactcctgtccatgcactgag
gctgactttgagtgtgattttggctttgagaggcagagtgatggaggatgcactgctgcc
ttctggtttgttccatcctccgtgtccaaagactgcaccactggagacagcttcctaaac
actacaggataccgtaaggctctgtccaataactgcactgcgggaacccttgggaagtac
cgccttaggaggcagaggtgtccccaccaggcccccagaggtctgcagctggtcaccagt
gagggaacactcacagccaccctaggggacaacgtgaccctcctggtgtttctggaggag
ggtgacggctccacaaccagtataacagtggactttggagacgggacggccatatcctac
actaacatcagctccatagaggatggggtcaaacatacctacagtaaagtgggcatttac
caagtggctgccacggcactcaacagcctgggttctgagagagtcttactatacctgcat
gttacttgtacacttgagcaagtgcagctttcagctccctcggtggttgttaggaataaa
gcagtggatctatcaacagtcctgaagccacgttatgttggaacagtcacctactactgg
tggttcaccaaccacactgagcctgtcgtgactttagtgggaggaatgtccttcaccttc
tacaaggagggaactcatactgtcaccgtgcaagtgtcagcaggcaacactgtccttcaa
gacaaaataactgttgcagtctatgaatatttccggtcacacgttttagcattctcctct
aatctggacgccttcaatcctgctgtggctgaatggagacaggacatcagtagagtggtc
aaggactccatggtccaagtcacagggatcaatggagagcagcttctggtgtcagtgctc
ccagggttgccaacggcagcagagttgtttatcatcccagagaaaaggccaacagagggg
acgatgaatagaaaagggacacatttagagcagctttctcaggtcctgctaagtgccctg
aaccaagacctcatccagtttactctgcggcccggggttcaggttaacgtttaccccaca
cgactgtctccagctcctctcgtggacaccagtgagagtgggcacaatggtgctgcagtc
attatgctcgtgtctgtagtatttgtgggtttggcagttttcgttatcttcaagttcaaa
aggaagatccctggcatcaacatatacacagaggagaggtcagagaaacaacaggaagtg
atccctacggtggcgtccatagctgtcccaaatactgagggagacatggtgacctctttg
gagcacttggacacagggccagatgcacgtggcataggatacctgccatctctcacagac
atcaaactctccgatgaaactccccatgtgttttaa
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