Oncorhynchus gorbuscha (pink salmon): 124043803
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Entry
124043803 CDS
T07892
Name
(RefSeq) chondroitin sulfate synthase 2-like
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ogo01100
Metabolic pathways
Module
ogo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124043803
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124043803
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124043803
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124043803
Glycosyltransferases [BR:
ogo01003
]
Glycan extension
O-Glycan
124043803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
124043803
NCBI-ProteinID:
XP_046218734
LinkDB
All DBs
Position
LG09:complement(56716679..56734460)
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AA seq
763 aa
AA seq
DB search
MRFAMFISLLRPIGPVIIGVSLGFTLSLLSVNWVEETCVLDGKASEEIRLAQDGNSKGAR
RPNSISTVDAEEDFEPRIVPYKPVQQSQTKQLFRAKYISTELGIRQRLFVGILTSKSTIN
TLGVAVNRTISHHLDTVVFFTGMRNRKVPHGMFVVTHGDERLIWNIFQTIKYILEHYVHE
YDWFYLAQDDTYTEADRIQQLVDHLSIDRELYMGRPEEFIGGEMEGRYCYGGFGYLLSRT
LLLRLKPFLENCRNDILSARPDEWLGRCIIDYANTNCVAEHEGLQYYHYEMGKNSDPSKV
KNVQFNNALTVHPVSDPEQMYRLHKHFTEIELRRTYDEIEKLQAEIKNVSKVAFDGNRSA
QWPVGINPTFEPKSRFEVIRWDYFTEEQVYSCIDGSPKCELRGIDRLDVADVIERAMGEL
NKKYKPVLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGRSRSITKRVHLVRPLSR
IEIIPMPYVTEATRVHVILPLTFQERGAVNHFLEVFATNLFETSDNAILTLLFIYDPFEA
QQVNQNDIFASVKVQINTYERKYPAVKILWISVKTETPSQIKFMDIISKKHPVDTLFFIT
NVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDYNPDIAFHNQEPPPTVDLVKDAGHFDRS
SFEEACFYNSDYMVTRTRMASDVQENEEIMETLDIYDMFVRYSTLHVFRAVEPALHQKYH
YQACNPQLSEDIYHRCVQSNLDGLGSRSQLAMLLFEHEQGNST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgcaatgtttatttctctgctgaggccgatcggcccggttattatcggtgtt
tctttgggatttaccttgagtttacttagtgtgaattgggtagaggaaacttgtgtcctc
gacgggaaagcgagtgaagaaatacgtttggcccaagatgggaattcaaaaggagcgagg
agacccaattcgatatcgactgtggatgccgaggaagattttgagccaagaatagtgcca
tataaaccagtccaacaaagccaaacaaagcaactttttcgggctaagtacatcagtaca
gagctggggatccggcagcgcctcttcgtagggatcctgacgtccaaaagcaccatcaac
acgttgggggtggccgtgaaccgcaccatcagccaccacctggacactgtggtcttcttc
accggcatgcgcaaccgcaaagtgccccacggcatgttcgtggtcacccatggggacgag
aggctcatatggaacattttccagaccatcaagtacatcttggagcactacgtccatgag
tatgactggttctacctggcccaggacgacacctacaccgaggcagaccggatccaacag
ctggtggatcacctgagcatagaccgggagctttacatgggcagacctgaggagtttata
ggtggggagatggaggggaggtactgctacggtgggttcggatacctcctgtcccgtacc
ctgctgctccggctcaaacccttcctggagaactgtaggaatgacatcctgagcgccagg
cctgacgagtggctgggcagatgcatcattgattatgccaacaccaactgtgtggctgag
catgaggggctgcagtactaccattacgagatgggcaagaactcggatccgagtaaggtg
aagaatgtgcagtttaataacgccttgactgtccacccagtatctgaccctgagcagatg
tacagactacacaaacacttcactgaaatcgaacttcggaggacatacgatgagatcgag
aagttgcaggcagagataaagaatgtgagcaaagtagcttttgatggcaaccggagcgcc
cagtggcccgttgggatcaatcctacgtttgagccgaagtcccgttttgaggtcatccga
tgggactacttcacagaggagcaggtctattcatgcattgacggctcccccaagtgtgaa
ctgcgtggcattgatcggttggacgtggccgacgtcatcgagagagccatgggggagctg
aacaagaagtacaagcctgtcctccacctgaagaagcagcagctgatcaacggctaccgc
cgctttgaccccactcggggcatggagtacaccctggacctgcagctggaggtggtcaac
cagaagggccgcagtcgctccatcaccaagagggtccacctggtgcgtcccctgagtcgc
atcgagatcatccccatgccttacgtcacagaggccaccagggttcacgtcatcttgccg
ttgacttttcaggaacggggtgccgtcaaccattttctagaagtgtttgccacaaatttg
tttgagaccagtgacaacgccatcttgactttactgttcatctacgacccattcgaggcc
cagcaggtcaaccaaaatgacatattcgccagtgttaaagtgcagatcaacacatacgaa
cgcaagtatccagcagtgaagatcctgtggataagtgtcaagacggaaaccccttctcaa
atcaaattcatggacatcatttccaagaagcacccagtagacacgctgttcttcatcacc
aacgtcaacaccaacgtcaactccgagttcctcaaccgttgccgcatgaactccatcaac
aactggcaggtattcttcccaatccacttccaggactacaacccagacattgccttccac
aaccaggagcccccacccacagtagacctggtcaaggacgccggacactttgaccgcagt
tctttcgaggaagcgtgcttctacaactccgactacatggtgacgcgcacgcgcatggcc
tccgacgtgcaggagaacgaggagatcatggagaccttggatatctacgacatgtttgtc
aggtactccaccctgcatgtgttcagggctgtggagccggctctgcaccagaagtaccac
taccaggcctgtaacccgcagctcagtgaggacatctaccaccggtgtgtccagagcaac
ctggatggcctgggatcacgttcccagctcgccatgctgttatttgaacacgagcaagga
aatagcacttga
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