Oncorhynchus gorbuscha (pink salmon): 124045824
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Entry
124045824 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124045824
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124045824
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_11
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
124045824
NCBI-ProteinID:
XP_046221454
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All DBs
Position
LG10:complement(28165536..28172285)
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AA seq
613 aa
AA seq
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MASKLWTKEEISCPVCLNTLTEPTTLPCGHNFCLDCIRKCWDESGSISSRSNAVSCCPYC
RETFRLRPTLTKNSILEKMVEKLKTTLLDTSPGYPYDGPEDVVCDVCTLLGSRRKAKAVR
ACRECKLSYCQSHLRAHLDILLLQKHTLVGVVVKELQLEKLCPQHDKPLDLYCRLERRCI
CSLCAVEEHKSHQTVSAETERAKKQALLAVEQIKSNSKLQMKEELLTQLGDAAGSLKGFA
QAAVEVSDMIFVELIHSLEKRRAEVRDSIKDREKTLAAQAARAETRLRQDITTLQRRNSD
LEKLAQTQDSILFLQRWQPISLLPDREPSVISERHSFGAVMSIITEFKELLKDMNVDFLE
KIKQAVANVDILESPVPMTKPQSRQVRRAHSECQSMPPVPLQKARSISRDFTFGIPKTRP
DFLHYAFQLTLDTDTAHRNLCFSDQNRKVTLVKSRGQSRTRSRLLKTFDFWEQVLCWEGL
TGSRYYWEADWRGKGVFIGVTYESIQRGGRGLECGLGYNVKSWSLQCSDTSYSAWHDNIE
TKITAKVSSPRIGVYLDHKAGTLSFYSISDSSMILLHSFLSEDFSEPLYPGFGVGVQSSL
ILCQLGRQRQLRT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaagctgtggacaaaggaggaaattagctgtccagtctgtttgaacacccta
acggagcctacaactcttccatgtggacacaacttctgcctcgactgtatcagaaaatgc
tgggatgagagtggtagtatcagcagcagaagcaacgcggtttcctgctgtccttactgt
cgtgagacattcagattgcgccccacactgactaagaactcaatactggaaaagatggtg
gagaagctaaagactactttactcgatacctctcctgggtatccgtacgatgggcctgaa
gacgtggtgtgtgacgtgtgtactcttctagggtccaggaggaaggcaaaggctgtgagg
gcctgtcgggagtgtaagctgtcctactgccagtctcaccttagagcccacctggatatc
cttctgttacagaagcacactctggtgggtgtggtggtcaaggagctgcaactggagaag
ctgtgtccccagcatgacaaaccgctggacttgtactgcagacttgagaggaggtgtatc
tgttctctgtgtgcagttgaggaacacaaaagccaccaaactgtctccgctgagactgaa
cgggccaagaaacaggcactgttggcagtggaacagatcaaatccaacagtaaactccag
atgaaagaggagctgctgacacaactgggagatgctgcgggatctcttaaaggatttgca
caagctgcagtggaggtcagtgacatgatcttcgttgagctgatccactccctagaaaag
aggagagcagaggtgagggactccatcaaagatagggagaagactctggctgctcaggca
gcaagagcagagacacgactgagacaggacataacaacactgcaaaggagaaacagcgat
ctggagaaactcgcccaaacacaagacagcatactctttctccagaggtggcaacccatc
agcctgctgccggatcgtgaacctagtgttatcagtgaaagacattcatttggagctgtg
atgtcaattatcactgaattcaaggagctgcttaaggacatgaatgttgacttcttagaa
aagattaaacaagcagttgcaaatgtggacattttggaatctccagtacccatgaccaaa
cctcagagcaggcaagtgagaagagcccattctgaatgccagtcaatgccaccggtgcca
ttgcaaaaagcacggagcataagcagagatttcacatttggaattcctaagaccagaccc
gacttcttacactatgcttttcaactcactctagacactgatacagcacaccgcaacttg
tgcttctctgaccagaaccgcaaggtgactctggtcaagtccagaggtcaatccagaacc
aggtcacgtctcctgaagacctttgacttctgggaacaagtgctgtgctgggagggcttg
accggttcccgttactactgggaggcagattggagaggcaaaggagtgttcattggagtg
acctatgagagcattcagaggggaggcaggggactagagtgtggcctggggtacaatgta
aagtcatggagcttacagtgctctgacaccagttactcagcatggcacgataacattgaa
accaagatcactgccaaggtctcttcccctagaataggggtttatttagatcacaaagca
ggaactctgtctttttacagcatatctgactcctccatgattctgctccatagttttttg
tcagaggacttctcagagccactgtatcctggttttggtgttggggtacaatcctcgttg
atactttgccaattggggagacaacgacaattgaggacatag
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