Oncorhynchus gorbuscha (pink salmon): 124046252
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Entry
124046252 CDS
T07892
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124046252 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124046252 (fancm)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
124046252 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Motif
Other DBs
NCBI-GeneID:
124046252
NCBI-ProteinID:
XP_046222364
LinkDB
All DBs
Position
LG10:complement(55563074..55635297)
Genome browser
AA seq
2154 aa
AA seq
DB search
MSGVNQMTLFQTWGASVPQKVSQTNNVKKSSGRRKATQNSRGSTAASVKTQKRATGITLP
PPAPRNTLWGEFDQGSTADSEVGDFEEVVAAADEDDDDLMVVAVYEAEKSLQIDGNLGQH
SEHTTNVESTCLTQISSSGSTYYKDFPGLDSSSAKVWIYPTNYPLRDYQLKISEAALFQN
TLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQTHMA
ELTGSTQAQQRQELWRSRRIFFLTPQVLVNDLSRATCPALHVKCVVIDEAHKALGNHAYC
QVVRQLGSQTQQFRILALSATPGGDTNSVQQVISNLLISHIELRSEESPDIQAHSHQRSL
EKVVVPLGESLAGHQALYLQVLERFTGRLIQNRAMSHRDLRSLTKYQLILAREQFRKNPP
PHVTGAQQGALEGDFALCISLYHGYELLLQMGLRSLFFYVQGIMDGTKEKSRARNELQRN
ATFMNLYQEMAAMFGKPTGPEEPFIYSHPKLQKLEEVVLGHFKTWAESSSTGSGPQEVST
RVMIFSSFRESVQEIAAMLNRHLPLVKVMTFMGQASAGKGVKGFTQKEQLEVMQRFREGG
FNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRKRQGRIVVILAEGREER
TYNQSQSNKRRVYKSIVGNSHSFHMFPHNPRMMPDGVHPALHKMHITCGQFDHRESSGRL
VGGWRGRRSHSLEGQRESLILPHDLVGHQESVKKDGFLSPSELTHWESTMKLGEGEAPPI
LRRSRFLSKQEGSPPRVELLSSGPTRELSLWEWRHWQNQPFPTHIVDHSNRCHHFTKVME
LIDGLRQEEGESRYELELLHHLHKEDVIGLTEEAQQEKSTKGKKQKEGKMTKSRTKMANL
SHKQKTSCLSSADLDRLELKKEVQRESISKAETTLVSPWTLIKNRVPSECDKEVTHDLRD
HPGLWPLSSTGDQPDMDFDCIILNNESESSEVNSPRDLESESVNCIAAVEQIDLNQLTSI
ADREPKSDEDSELEALFYLPKWDAAVPKLQPLRQKLESLRVILVNVTELLSRSPPALHFD
LDSPQFDPGPTPFTTKDCSHTLPVEPLDELLDVGQTFHVNFSLEVDEDFAEPASQSPNVD
LDVGSLDCESHCDPPHQQHSASSPITVPAESMGRESALGSPSWDEVFEDDSNDIKEDDMD
DKADFKPPCHPTQPKAQHSKTNLDESMDLFGDDGTFLQMTIPDIPTPGNVSIRIPSPLKA
PEREWLIGSSKSVTETTMVYQVKPSRSHASPVAQQEPAQDFENFVCSQDLFSVNFDLGWE
EDEGDTEAAPSPFPSKPSPPGSKKQEAPLSSTVNEPKLSGSSTPHFSFHRMCVSTPLAAC
LGRKRADTSALASPQTSPLTSKSGALFSPIPTLGPRRVLLPGPSTTPSTSFSFLKRKCQG
TLQNAQTLKAQAGDPGNGSIEMGHSLSHTSILDPLHPGLCTSDSEEEVITRKRVHHHVKA
NPLSSPVSMLLSDVDSPLQVTRKSKHAVARISDESEGEGEAMSDDDFQNTSVRQPRAPPR
VAVKPSASHGKAEQAVRHHYQGARHFLDEEAALSEGEEVSSDEEDGEEQNRSLEGFVVSN
TQCSQGINDSEMQGVYLKSVRSPAVAGKFKMIYKQNHNMDIFSQMPELDETYAEDSFVVR
GSDEEELGEEDEEVPLELIYEDSFVEGRRQYPTRRKALIRNIRAQAGSAPATLDKRAADP
QPNPAGKNKRSRIVHLVDSSSEEEVEKSRNSVKAEGVAAICRLTELQQQNDWVFKAPRQQ
MPPGGSTRASTASCAVGPRVLSGARSSSMNSVMEPSAPSATSRTSSVSSVRGPREEQQED
RCRQRLHQQALLSEELDFEQSESLLLSSKQPQATSSTSSVPHVQSSFCQAATLSKPPASS
SNPSGLVAVLVDSRCITACVDVVSSLRQRCAVAAHVCSLDGCDFVVSNRMAVERQCQSEL
AGMPNRKRLVERVTSLQSLFERVCLIVEKDRTKPSQASRPFQPTRYYDSTLASLVRAGVR
LLVSRGPEESATLLAELARVEQRKGQAISVPLEVKGHRQQALLFYRTLPCVSYVNALNMS
HSFRSVGHLVNSSIEALQKGACVSRPRAEEIYRCLRYSCDTTLMTTNTPGKNNL
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgtgaaccaaatgactttgttccagacgtggggagcatctgttccgcaaaag
gttagtcaaacgaataatgtaaagaagtcttccggacgacgaaaagcaacgcaaaacagc
aggggcagcacagcagcctcagtcaagactcagaaaagggcgactggtataactttgccg
cccccggcgccccgtaacacgctatggggtgaatttgatcaggggtccacagctgacagc
gaggtgggagatttcgaggaggttgttgctgctgctgatgaagatgatgatgatttaatg
gtagttgctgtttatgaggcggaaaagtctttgcaaattgatggaaaccttggacaacat
agtgaacacacaacaaatgttgagagcacttgtctcacacagataagctcaagtggatca
acatattacaaagacttccctggccttgacagctcctctgcaaaggtatggatctacccc
accaactatcccttaagggactaccaactaaagatatcggaggcagctttatttcagaat
acactggtatgcctccccactggcctgggcaagactttcattgctgctgtggtaatgtac
aacttttatcgatggtatccatctggaaagatagttttcatggcaccaacaaaacccctg
gtggcacaacaaatagaagcgtgctacaaagtgatgggtattccacagacacacatggca
gagttgacagggagcacgcaggctcagcagaggcaggaactgtggaggtccaggcgcatc
ttcttcctcactccccaggtgttggtgaacgacctgtctcgagccacctgccccgcgcta
cacgtcaagtgtgtggtgattgacgaggctcacaaggccctggggaatcatgcctattgc
caggtggtgagacagttggggagccagactcaacagtttcgcatcctggcactcagcgcc
acgccaggtggagacacaaattcagtgcagcaagtcatatccaacctgctgatctcccac
attgagctgcggtctgaagagagccctgacatccaggcccactcccaccagcgcagcctg
gagaaggtggtggttcccttgggggagtcgctggccgggcaccaggccctctacctacag
gtactggaacggttcacgggccgtctgatccagaacagggcgatgtctcaccgcgacttg
cgctccctcaccaagtaccagctcatcctggcccgggaacagttccgcaagaaccctccg
ccccacgtcacgggggctcagcaaggggctctggagggggactttgccctgtgtatcagc
ctgtaccatggctacgagctgctgctccaaatgggcctgcgttccctcttcttctatgtc
cagggcatcatggatggcaccaaagagaagtctcgagccaggaacgagctacagcgcaac
gccaccttcatgaacctgtaccaggagatggcggccatgtttggaaagcccaccggcccc
gaggagcccttcatctacagccaccccaaactgcagaagcttgaggaggtagtgctcggg
cactttaaaacatgggctgagagctccagcactggctctgggccccaggaagtgagcaca
cgtgtgatgatcttttcgtcgttccgggagagtgtgcaggagattgccgccatgttaaat
cgccacctgcccctggtcaaagtcatgacctttatgggccaggcctcggcagggaagggg
gtcaaagggttcacccagaaggagcagctggaggtgatgcagaggtttcgggaggggggc
ttcaacaccctggtgtccacctgcgtgggcgaggaggggctggacatcggcgaggtggac
ctcatcgtgtgcttcgacgcccagaagagtcccatccgcctggttcagcgcatgggccgc
accggacgcaaacgccagggccgcatagtggtcatcttggccgagggacgagaggagaga
acctacaaccagagccagagcaacaagcgcagggtgtacaagtctatcgtggggaacagc
cacagtttccacatgttcccccacaacccccgcatgatgcctgacggggtgcatcccgcc
ctgcacaagatgcacatcacctgtggccagtttgaccaccgggaaagcagcgggcggctc
gtcgggggttggagggggcgcaggtcccactccttggagggccaacgtgagtcccttatt
cttccacatgatctagtcgggcaccaggagagtgtgaagaaggatggcttccttagcccc
tctgagctcactcactgggagtctacgatgaaactgggggagggggaggctccacccatt
ctaagacggtcccgcttcctctcaaaacaggaaggttcgccacctcgggtggagctgctc
tccagcgggccaaccagggagctgtctctgtgggagtggagacactggcagaaccagccc
ttccccactcacattgtggaccactccaaccgctgccaccacttcaccaaggtcatggag
ctcattgacggcctgcgccaggaagagggtgaaagcagatatgagttggagctgctgcac
cacctccacaaagaagatgtcataggcctcacggaggaagcacaacaggaaaagtccacc
aaaggaaagaagcagaaagagggaaaaatgacaaaatccagaaccaaaatggccaacctg
agccacaagcagaagacttcctgcctttcctcagctgacctagaccgtttagaactcaaa
aaggaagtgcagagggaaagcatttctaaagcagagacaaccttagtctctccatggacc
ctgataaaaaacagagtcccttcagaatgtgacaaggaggtgactcatgacctcagagat
cacccaggcctctggccactctcctccacgggtgaccagcctgacatggattttgactgt
atcatactcaacaacgagagtgaaagttcagaggtcaattctccaagggatttggagagc
gaatcagtgaactgcattgctgctgtagaacagattgacctcaatcagttgacctcaatt
gcagaccgtgaacccaagtcagatgaagattctgaactggaggctttgttttacttgccc
aaatgggatgctgctgtccccaagttgcagcccctgagacagaagttagagagcttgagg
gtcattctagtcaacgtgacagagcttctgtctaggtctcctccagctttgcactttgac
ctggacagccctcagtttgaccctgggcccacccccttcaccaccaaggactgttcacat
acacttccggttgaacctctggatgaactcctggatgtaggtcagacattccacgtgaat
ttctccctggaagtggatgaggactttgccgaacctgcttctcaatctcccaatgttgat
ttagacgttggttctctagactgtgaaagccattgcgacccacctcatcagcagcactcc
gcttcatcgcccattactgtgccagcagaaagcatgggtagggaaagtgcccttggcagc
cctagctgggatgaggtcttcgaggatgacagcaatgacataaaggaggatgatatggat
gataaagcggacttcaagccaccatgtcatcccactcagcctaaagcccagcactctaaa
acaaacctggacgagagcatggatctgtttggagatgacggcaccttcctccagatgacc
attccggacatccctacgccagggaacgtcagtatccgaatacctagccccttgaaggct
ccggagagggaatggttaatagggtcaagtaaaagtgtgacagaaacaacgatggtgtat
caggtcaaacctagtcgtagccatgcttctcctgtagcgcagcaggaaccggctcaggac
tttgagaactttgtctgttctcaggatttgttctctgtcaactttgatttgggctgggag
gaggatgaaggggacacagaggctgctcctagtccattcccctcaaaaccttcaccccct
gggtccaaaaaacaggaagcacccctttcttccacagtgaatgagccaaaactctctggc
tcatccactccccactttagtttccataggatgtgcgtgtccacacccctggcagcctgt
ctaggaaggaagagggcagacacctctgctctggcttcgcctcagacctctcctctgacc
tccaagagcggagctctgttctcaccaatccccacattaggaccgaggcgagttctcctg
cctggtccttccaccaccccatccacttcgttctcattcttaaagaggaaatgccagggg
accttacagaatgcccaaactctcaaagctcaggcgggggacccaggaaatggttcaata
gagatgggacacagtttgtctcacacatccatcttggacccccttcatccaggcctgtgc
accagtgacagtgaggaggaggttatcacccgtaagcgggttcatcatcatgtcaaggca
aaccccttgtcttctccagtgtcaatgcttctcagtgatgtggattctcctttacaagtg
accaggaagtcaaagcatgcggtggcacgcatttcagatgagagcgagggggagggggag
gcgatgtctgatgatgacttccagaatacctctgttcgacagccaagagcgcccccccgt
gtggctgtgaaaccatccgcgtcgcatgggaaagctgagcaggccgtgcggcaccactac
caaggagcccgtcactttctggacgaggaggcggcgctgtccgagggggaggaggtgtca
tctgacgaagaggacggtgaagagcagaaccgctcactggagggcttcgttgtgagcaac
acccagtgctcccagggaatcaacgattctgagatgcagggggtttacctaaagtcagtg
agaagccctgctgtggctggcaaattcaaaatgatctacaagcaaaaccacaacatggac
atcttctctcagatgcctgagctggacgagacatacgcggaggacagctttgtggtgagg
ggcagtgatgaggaagagctcggcgaggaggatgaggaggtcccattggaacttatctac
gaggactccttcgtggaggggaggaggcagtaccccaccagacgcaaggcgctgatccga
aacatcagggctcaggctgggagcgcgcctgccactctggacaagagggctgctgaccct
caacctaatcctgctgggaaaaacaagcgctcccgcatagtgcatttggtggactccagc
tcggaagaagaagtggagaaaagtagaaatagtgtgaaagctgaaggtgttgctgccatc
tgcaggctaactgagttacagcaacagaatgactgggtgtttaaagctccacggcaacag
atgccccctggtggatccaccagagcctccacagcgagctgtgcggtggggcctagagtc
ctcagtggagccaggtcctcctctatgaactctgtgatggagcctagcgccccaagtgca
accagcaggacctcctcagtgagctccgtgaggggacctagagaggagcagcaagaagac
aggtgtcgccagaggctccatcagcaggccctcctgtctgaggagctggactttgagcag
tcggagtctctgttgctctcaagtaaacagccacaggctacctcctccacgtcctcagta
ccccacgtccagagctccttctgtcaggccgccactctaagcaagccccctgcctcgtca
tcgaacccatcgggccttgtcgctgtactggtggacagccgctgtatcacagcctgcgtg
gatgtggtctccagcctgcgccagcgttgcgctgtcgcggcccacgtgtgctcgctggat
ggctgcgacttcgtggtcagtaaccgcatggcggtcgagaggcagtgccagtcggagctg
gccgggatgccgaaccgcaaacgacttgtggagagggtgaccagtttgcagagcctattt
gagcgggtctgtctcatcgtagagaaggaccgcaccaaaccaagtcaagcttcccgtcct
ttccaacctacacgctactacgacagcacactggccagtttggtgagggcaggcgtccga
ctcctggtgagtagggggcctgaggagagcgccaccctactggctgaactggcccgagtg
gagcagaggaagggccaggctattagcgtgccattagaggtcaaaggtcaccggcagcag
gcgctactcttctaccgaacgctgccctgtgtcagctatgtcaatgccctcaacatgagc
cacagcttcagatcggtgggccacctggtcaacagctctatcgaggctttacagaagggg
gcgtgtgtgagccgccccagagccgaggagatctaccgctgcctacgctactcctgtgac
accaccctgatgactacaaacacacccgggaagaacaacctttag
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integrated database retrieval system
