Opisthocomus hoazin (hoatzin): 104328584
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Entry
104328584 CDS
T08436
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104328584 (CTCF)
03036 Chromosome and associated proteins [BR:
oha03036
]
104328584 (CTCF)
Transcription factors [BR:
oha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104328584 (CTCF)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104328584 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
LIM
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
104328584
NCBI-ProteinID:
XP_009931914
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
CHIPQNQADGSEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIIT
LQVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHT
LPLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEE
GKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPR
RSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGEL
VRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRH
MRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR
KQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTH
TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC
SGLDGGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAE
PEVKEETPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDA
ETAEEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
tgtcacataccacaaaaccaagcagacggcagtgaagtagtgcaggatgtcaacagtggt
gtgcagatggtgatgatggaacagctggatccaactctgcttcaaatgaagactgaagta
atggaaggtgcagtgcctcaagaaacagaggccacggtggatgacacgcagatcataaca
cttcaggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaa
gtacctgtaccagtgactgtacctgttgccaccacgtctgtggaagaacttcagggagct
tatgaaaatgaggtgtccaaaggaggcctgcaagagggagagcccatgatctgtcacacc
cttccgttaccagaaggcttccaggtagtgaaagtgggtgcaaacggtgaggtggagaca
ctggaacaaggtgaacttcagccacaggaagatcccaactggcaaaaagatccagactat
cagccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaa
ggcaaagatgtggatgtctccgtgtatgactttgaagaggagcagcaggagggtttgttg
tctgaggtcaatgcagaaaaggtggtgggcaatatgaagccacctaaaccaaccaaaatt
aaaaagaaaggtgtaaagaagacattccagtgcgaactgtgcagttacacttgtccacgt
cgttccaacttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccat
ctctgtggcagggctttccggacagtcacgttgctgaggaaccacctcaacactcacaca
ggtactcgccctcacaagtgcccggactgtgacatggcctttgtgaccagcggagagttg
gttcggcatcgccgctacaaacatacccacgagaaaccattcaaatgttcaatgtgtgat
tatgctagtgtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgt
ccgttccagtgcagcttgtgcagctatgccagcagggacacctacaaactgaagaggcac
atgaggacccactctggagagaagccatatgaatgttacatctgccatgctcgcttcact
cagagtggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattt
cactgtcctcactgtgatactgttatagcgagaaagagtgacttgggtgtccatttgcga
aagcagcattcctacattgagcagggcaagaagtgtcgctattgtgacgctgtgtttcat
gaacggtatgccctcatacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgt
gaccagtgcgattatgcgtgcagacaggagcggcacatggtcatgcataaacggacccat
actggagaaaagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagctc
ctcgatatgcacttcaaacggtatcacgatcccaactttgtccctgctgcctttgtctgt
tccaagtgcggcaagacattcactcgcaggaacacgatggccagacatgctgataactgc
tctggcctagatggtggtggggaaggagagaatggaggagagacaaagaagggcaaacgt
ggccgaaagagaaagatgcggtctaagaaagaagattcctctgacagtgaggaaaatgct
gaaccagatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgaa
ccagaagtcaaggaagagactcctgcaccacctcccagtaagaaacgaagaggaagacca
ccaggcaaagctgccacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaa
gaccagaacactggtgaaattgaaaacattatagttgaagtaaagaaagaacccgatgcg
gaaacggcagaggaagaggaggaggaagctcagcctgctgtagtggaagctcccaacgga
gacctcactcctgagatgattctcagcatgatggaccggtga
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integrated database retrieval system
