Opisthocomus hoazin (hoatzin): 104330588
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Entry
104330588 CDS
T08436
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104330588
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104330588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Chromo
ResIII
DEAD
MUN
Motif
Other DBs
NCBI-GeneID:
104330588
NCBI-ProteinID:
XP_009934121
LinkDB
All DBs
Position
Unknown
AA seq
2650 aa
AA seq
DB search
MLYFAVPSVAGGVQDLKDVLGKDVYSHKLNIGNTEAALGAGSLGQRSGSRRSPTWGCSEE
SWPARSDYNGVLPQAYAEVTKLYQKFTEEQDEVSREVTMTATDAGGQCQCPEEEPDGAPQ
KRTSTQNGMQDSGGGGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRRREPKEPKEPKKAKE
PKKPKEPKQREVAKKPRKPREPKVPKEPKDKRSGCEPGPRSRPRKSSKDTPVEKKKKGKR
KNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGE
TIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEVSGESPASLVMFCXL
FFFFLCSSYLHCKWATLEEVEXXPAICLTLESPXTYLSFSSLLSQPDEDLFNPDYVEVDR
ILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHME
RPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITF
LSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDT
QGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMAL
EHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLDEFGDLKTEEQVKKLQSILKPMM
LRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMM
ELRKCCNHPYLINGAEEKILEDFRKTHSPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGG
HKVLIFSQMVRCLDILEDYLIQRRLAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASL
KLGLDKAVLQDINRKGSTNGVQPLSTMGVEERKGAYGALMDEEDEGSKFCEEDIDQILQR
RTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVI
DRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLL
IFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDG
QNQALQNHSGIAVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDW
WNAEADKSLLIGVFKHGVYPACLLPARDERAGSLQCTVLVDAVAWLAPLLSRELQSSPVR
GLARSRHSYPDLCLWALSEGSSRRSQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKE
LLPRAEMLVPGNHGYWLQDEMFRRASEMDSVNKEMQRRWTRREQADFYRTVSSFGVIYDQ
EKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPIT
EERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKH
GLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPGPQTLCCLYQTNSKLYSSPLYSQVGRT
CESLENEAESQMKLESVDSAMSQAGGSPPDANCETFMSKVRDIISSNYDESSLPDSLVCM
MYDEKACNSEQSSLARDSPSCTDAGSGVAKLSEGKLEGDEDPSSCDADAVRETPFLEGLA
VGCDEMDSQSKEAEPSPSPPESDPSRSVPAGLCEALQPKGDLTGPAPVLPERGAVEGVIN
MGLYSPGLHNYEIKVPPEQRFISLLQEKGMEAKSGPSQSHSEEDEEEEEDDDNSEAAADV
VEGLGGLRTRAGCDPEANDMGGEEQSSGVPTPEGTCPEDMNGERESLGLGTPEGLGDPGP
GSREDRGLDEESTLRHSPXXXXXXXXALPLPDQRGLPAVTQAAALLGGWLGDGTLLEPAG
GWAGRVGGGAPASREAGRXWALLSVPFSDGPEKYLEEESKSSASVLPGDINDLQDARAPT
IAQLLQEKTLYSFSEWPKDRVIINRIDNICHAVLKGKWPSSSQQLETHSLLTXVASSAGS
RSSFAESEAPNPSFSNGVLISQVQKEGFLSPAFAKDERKHRRPYEFEMERDAKQRSLEQL
AATHVHAPIVLNGWRDAAVDLSRASDGSPGNASPFSLNTNMPKLGTVNTLQGSLGMDLSG
ILQAGLIHPVTGQIVNGSLRREDAAMRRRRGRRKNVEGMDLIFLKERPLPTRMQQDVQED
QPQPPHNSPLPDGPVAATSTPQPVPAAGGQAEKAVPNKSLLDWLRQQSDYTLDVPGFGTN
FSDKPKQRRQRCKDPSKLDINSLTGEERVPVVHKGTGRRLGGATAPALKELPRWLDANLE
YAVAADWADIVKLSGYLPESKFNRVLTEPVLRDAGPRRRGRRPRSDLLKGPGVVADSSSG
MGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLP
GMATVPQMFGVGGLLNPPMTTTCTATAPTALTSTTKGGTANAEKATEDKQGSQDVKKETL
SEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTR
HSEAANLESQKRKRKKAKGESANLEPETVSLPEKEAANSQNCAAQTPRLSAESERDGPAE
EERQAARETD
NT seq
7953 nt
NT seq
+upstream
nt +downstream
nt
atgctgtactttgcagttccctccgtggctgggggtgttcaggacttgaaggatgtgctg
ggaaaggacgtttacagccacaaattgaatattgggaacaccgaagctgcgctgggcgct
ggcagcctcgggcagcgttcaggctcccggcgcagtcccacctggggttgcagcgaggaa
tcgtggccggcaaggtcagactataatggtgtccttccccaggcttatgctgaagtgact
aagctataccaaaagtttacggaggagcaggacgaggtgtcccgcgaggtgacgatgacg
gccacggacgcgggcggacagtgccagtgcccggaggaggagcccgacggggctccccag
aagcggacgagcacccagaatgggatgcaggacagcgggggcgggggcacgggggtgaag
aagaaacggaagaaaaaggatctgggagagcaggaagggggagaaaaagcagctgtggag
gtgaaaccaaagaggaggagagagcctaaagaaccaaaagagcctaaaaaggctaaggag
cccaagaagccgaaggagcccaagcagagggaggtggccaagaagccccggaaacctcgg
gaacccaaagtccccaaggagcctaaagacaagaggagcggctgtgagcctggccccaga
tcaagaccccggaagagcagcaaggacacccctgtggagaagaagaagaaagggaagagg
aaaaatgagataccagtggacagtttggatctggatcaggatctgctgagcccgtccgtg
cagagcccggaggagtcggcggagtcagccgacagccagaaacgccgctcaggacggcaa
gtgaagaggaggaagtacaacgaggacctggatttcaaggtggtggacgatgacggcgag
acaatagccgtgctgggagctgggcgaacctccgcgctctccgcctctactctggcatgg
caggcagaggagcctcccgaggatgacgccaatatcattgagaagatccttgcctccagg
atggtgcagaaggaggtgagtggtgagtcccctgcctctttggtcatgttttgttgatta
tttttttttttcctttgcagctcctacctccactgtaagtgggcaactctggaggaggtg
gagnnnntccctgccatctgtttaaccctggaatcaccttgaacttacctctctttttcc
tctttgctgtcgcagcctgatgaggatttgttcaacccggactacgtggaggttgatcga
attctggaggtggctcacacgaaggacccggacaccggggaggaggtgactcactacctg
gtgaagtggtgctcgctgccctatgaggagagcacctgggagctggaggaggatgttgac
ccagggaagattaaagagtttgaagccctccagatccctccagaaatcaagcacatggag
cgcccggcatctgagtcctggcagaaactggagaagtcccgggagtataagaacagcaac
cagctgcgggagtatcagctggagggaatgaactggctgctctttaactggtataacagg
aagaactgcatcctggccgacgagatggggctggggaagacaatccagtccatcaccttc
ctctcagaaatattcctgatgggcatccacggccccttcctcatcatcgcacctctctcc
accatcaccaactgggagagggagttccgcacctggacggagatgaatgccatcgtgtac
cacggcagccagatcagccggcagatgatccagcagtacgagatggtgtacagggacaca
cagggtaaccctctccctgggatcttcaagttccaggtggttatcaccacctttgagatg
atccttgccgactgcccggagctgaagaagatccagtggcgctgcgtggtcattgacgag
gcccatcgcctgaagaacaggaactgcaaactgctggaggggctgaagctgatggccctg
gagcacaaggtgctgctgacagggacccccctgcagaactcggtggaggagctcttcagt
ctcctgaatttcctggagccgcagcagttcccctcagagacagccttcctggacgagttt
ggagacctgaagacagaggagcaggtgaagaagctgcagtccatcctgaagcccatgatg
ctgcgacggctgaaggatgatgtagagaagaatctggcacccaagcaggaaaccatcatc
gaggtggagctgaccaatatccagaagaaatactaccgggccatcctggagaagaacttc
tccttcctctccaagggtgccaaccagcacaatatgcccaacctcatcaacaccatgatg
gagctgcggaagtgctgcaatcacccgtacctcatcaatggggcggaggagaagatcctg
gaagacttccgtaaaacacacagcccggaggcggccgacttccagctgcaggccatgatc
caggcagccgggaagctggtgctcattgacaagctgcttcccaagctgatcgccggcggg
cacaaggtgctcatcttctcccagatggtgcgctgcctcgacatcctggaagactatctc
atccagaggcggttagctcaggctcgctgccaccggatcgggcagagcaaggcggtgaaa
gtctatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaaggccagcctg
aagctgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaacggg
gttcagccgctctccacgatgggtgtggaggagcggaagggtgcctatggcgctctcatg
gacgaggaggatgaaggatcgaagttctgcgaggaagacattgaccagatcctccagcgc
aggacacagacgatcaccatccagtctgaggggaagggctccacgtttgccaaggccagc
ttcgtagcatcagggaacaggacggacatttccttagatgaccccaacttctggcagaag
tgggccaagatagcagagctcgatacggatgccaagaacgaaaaggagagcctggtcatc
gacaggccccgggtgcggaagcaaaccaaacactacaactccttcgaagaggacgagctg
atggagttctccgagctggacagtgactcggacgagcgacccacgcgctcgcggcgcttc
aacgagaagacgcggcggtacctgcgcgctgagtgcttccgcgtggagaagaacctgctc
atattcggctggggacgctggaaagacatcctgacccatgggcggttcaagtggcacctg
aatgagaaggacatggagatgatttgtcgggccttgctggtctattgcgtcaaacactac
aagggggatgagaagatcaagagttttatctgggatctcatcacgccgacgaaggacggc
cagaaccaggctctgcagaatcactcaggtattgcggttctgctgcgggtgcgaatgctc
tactacctgaaggctgaagtgctgggggaggccgcggacaaagccttcgaggggaccccc
gccagggagctggacgtgctgctgccggacattgactacgtggagattccagtggactgg
tggaacgccgaagccgataaatccctgctcatcggcgtcttcaagcacggtgtgtaccca
gcttgtctgttgcctgcgcgagatgagcgtgcagggtctctgcagtgcacggtgctggtg
gatgccgtggcctggctggccccactgctgagcagggagctgcagtcctctcctgtgcgt
ggcctggcccgcagccgtcattcctaccccgatctctgcctctgggctctctctgaagga
agctcaagacgttcccaggatggctccgactcagacagatcctgctggcctgtctcatct
gccctcacagccaggctgcggaggctcgtcaccgtctaccagcgctgcaaccgcaaagag
ctgcttccccgcgccgagatgctggtgcctggtaaccatggatactggctgcaggacgag
atgttcaggagagcctctgagatggactcggtgaacaaagaaatgcagagaaggtggacc
aggagggagcaggcagatttctaccgcactgtctcctcgtttggggttatctacgaccag
gagaaaaagatctttgactgggcccagttccgagccatctctcgactggagaagaagaca
gatgagagcctggagaagtatttctacagcttcgtggccatgtgcaagaatgtctgtggt
ctcccactgtggaaagaggatggtcccccagaccctgacatctatgtggagcccatcacg
gaggaacgtgctgccagaaccctctaccgtatcgagcttctgcgaaaggtgcgcgagcag
gtgctcaagtgtccgcagctccacgagcggctcaagctgtgccggccgagcctgtacctg
ccggtgtggtgggagtgtggcaaacacgatcgggacctgctgatcggcaccgccaagcac
ggcctgaaccgcactgactactacatcatgaatgacccccagctgtcttttttagatgcg
tacaggaactatgcccagcataaaagaacggggctcccgggcccacagaccctgtgctgc
ctttaccagactaactccaaactctacagttcccctctgtacagccaggtgggccggact
tgcgagtccctggagaatgaagccgagagtcagatgaagctcgaaagcgtagacagcgcc
atgtcccaggctgggggcagcccgccggatgcgaactgtgagacgttcatgtctaaagtc
cgggacatcatttccagtaactacgacgagagctcgctgccggactcgctggtgtgcatg
atgtacgacgagaaggcctgcaacagcgagcaaagctcccttgcccgagacagcccaagt
tgcacagacgctggaagcggcgttgctaaactctctgagggcaagctggagggggacgag
gacccgtccagctgcgatgcggatgccgtgagagagacccccttcctagagggtttggcg
gtgggctgtgacgaaatggacagtcagagcaaggaagctgagccttcgccttctcccccc
gaaagcgacccttcacggagcgtcccagcagggctctgcgaagccttgcagccgaaggga
gacctcactggccccgcaccggtgctgcctgagcgcggtgccgtggaaggggtcataaac
atggggctctacagtcctggtcttcataactatgaaataaaggttcctcctgagcagagg
ttcatcagtctgctgcaggagaaaggaatggaggccaagtcagggccaagtcagagccac
agcgaggaagatgaggaggaagaagaagacgatgataattctgaggcagcagcagatgtt
gtggaaggcttgggtggtctcaggaccagggctggttgtgaccctgaggctaatgacatg
gggggtgaggagcagagctctggtgtccccacacctgagggcacttgcccagaagacatg
aatggtgagagagagtccctggggctggggacacccgaggggctgggggaccccgggccg
gggagcagggaggaccgtggcctggatgaggagagcaccctgcggcactcgccnnnnnnn
nnnnnnnnnnnnnnnngagccctgccccttcctgaccagcgtggcctgcctgccgtgacc
caggctgctgcgcttcttggtggctggttgggagatgggacccttctggagccagctggg
ggctgggcagggagggtgggaggaggtgctccggcctcgagagaggcagggcggtgatgg
gctctgctctctgtccctttctcagatggtccagagaagtacttggaggaggagagcaag
agttctgcttctgtcctgcctggggacatcaatgaccttcaggatgcccgggcaccgacc
atagcccagctgctgcaggagaagacgctttactccttctcggagtggcctaaggaccgt
gtgatcatcaaccgcatcgacaacatctgccacgccgtcctgaagggcaagtggccttcc
tccagccagcagctggagacgcacagcctgctgacgngggtagccagcagtgccggcagc
aggagcagctttgccgagtccgaagcccccaaccccagcttcagcaacggggtgttaatc
tcgcaggtacaaaaggaaggtttcctgagcccggcctttgcaaaggacgagcggaagcac
aggaggccctatgagttcgagatggagagagatgccaaacagaggagcttggagcagctc
gcagcaacccatgttcatgcacccattgtgctgaacggctggcgcgacgcggcggtggac
ttgtccagagcctctgatgggtcccccgggaacgcctctcccttctccctgaacacaaac
atgcccaaactggggaccgtgaacacccttcagggctctctgggcatggacttgtctggc
atcctccaggcagggttaatccatcctgtcacgggacagattgtaaacggcagcctccga
agagaggatgctgccatgaggaggagacggggcaggagaaaaaatgtggaagggatggac
ctcatcttcttgaaggagaggcctcttccaaccaggatgcagcaggatgttcaggaagac
cagccgcagcccccccacaacagtcccctccccgacgggccggttgctgctacctcaact
ccacagccagtcccagctgcaggcggccaagcagagaaggctgtccccaacaagagtctc
ctcgactggctccgtcagcagtccgactacacgctcgacgttcccggctttggcacaaat
ttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccagcaagctggacatt
aactcactcacgggagaggagcgggtgcctgtggtacataagggtaccggacggcggtta
gggggagccacggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggag
tatgctgttgcagctgactgggctgacattgttaagctttcaggctacttaccggaaagc
aaattcaatcgcgtcctaacggagcctgtgctgcgagacgcggggccccgccggaggggg
aggaggccccgaagcgacctcctcaaaggccccggcgttgtagcagattcttcttccggc
atgggaccattgttcatgaacggactgatcgctgggatggacctggtcggactgcagaac
atgagaaacatgcaggggatccctctgaccgggctggtggggtttcctgccggctttgcg
gccgtgcccgccggcgaggacgtgaaaagcacgctgagcatgttgcccatgatgctgccg
ggcatggctaccgtgccgcagatgttcggcgtcggaggactcctcaacccccccatgaca
actacttgtaccgcgactgctccgactgcgctgacaagcacaacaaaaggcggcacagcc
aacgcggagaaagctactgaggataaacagggcagccaggacgtgaaaaaagaaactctc
tcggaagacaagcctggtcctagttcgttttctaatcagacagaatccgcaataactacc
agtagtcctgtagcttttaacccgttccttatcccggggatgtctcctggactgatctat
ccctccatgttcctttcccctggcatcggcatggcgctgcccggcatccagcagacccgg
cactcggaggcagccaacctggaaagccagaagcggaagagaaagaaggcgaaaggggaa
tcggcaaacctggagccagaaactgtctctctgcccgagaaagaagctgccaacagccag
aactgtgcagcgcaaacgccgcggctgtcggcagagagcgagcgggacggaccagcggag
gaggagcgccaggcggctcgcgagaccgattag
DBGET
integrated database retrieval system
