KEGG   Opisthocomus hoazin (hoatzin): 104336309
Entry
104336309         CDS       T08436                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104336309 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oha03041]
    104336309 (SMNDC1)
Spliceosome [BR:oha03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104336309 (SMNDC1)
 Complex B
    104336309 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104336309 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 104336309
NCBI-ProteinID: XP_009940439
UniProt: A0A091VES8
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaagaccttgctaagcagttagcgagctacaaagctcagctgcagcaagttgag
gctgccttatctgggaacgcagaaaatgaagatctgctaaaactgaagaaagacttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttcagaaactcttgcaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggggataggtgtatg
gcgatatggagtgaggatggacagtgttatgaagctgagattgaagaaatagatgaggag
aatgggacagctgcggtcacttttgctggatatggcaacgctgaagttacacctctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaatcaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcccctgagagcgtaactggcaaggttggagtcggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctcgaaatacaatgtcaggcatttgatgcctcagtaa

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