Opisthocomus hoazin (hoatzin): 104336624
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Entry
104336624 CDS
T08436
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104336624 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104336624 (PBRM1)
03036 Chromosome and associated proteins [BR:
oha03036
]
104336624 (PBRM1)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104336624 (PBRM1)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
104336624 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104336624
NCBI-ProteinID:
XP_009940771
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD
YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLL
FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDNQGANSELSSP
GYLKEILEQLLEAIAVATNPSGHLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQN
GTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRI
RTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGDRLSAITMALQYGSESDED
AALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFHLPSKKKY
PDYYQQIKTPISLQQIRTKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQ
QVMQAKKKELARRDEIEDGDSMISSATSDTGSSKRKSKKNIRKQRMKILYNAVLEARESG
TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYAAEEAMIEDMKLMFRNA
RHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKLKLSRKSGISPKKSKYMTP
MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKKPVDMEKIRSHMMANK
YQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLL
IQELIHNLFVSVMSHQDDEGRCYSDSLAEIPEIHAVDPNFPNKPPLTFDIIRKNVENNRY
RRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYT
TKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSSLHRTYSQDCSFK
NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGKDKEVFKSDYYNKVPVSKILGKCVV
MFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRV
ASVFANTDKVDEDKHAETLEDGKMGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDM
WLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVF
LSNLEETCPMTCILGKCAVLSFKDFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKR
FSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQHLEAKFAELEGGDEDMEEMGEEEGES
TPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEAT
KKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGV
IGQNVPPIVGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPP
PKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGA
HTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagaggcgaagagctacctcgccttccagcagtgtcagcggaggagacttt
gatgatggccaccactccacaaatataccaggcccaagcagaaagaggaggagactttcc
aatcttccaactgtagatcctattgctgtatgccatgaactttataacaccatcagagat
tacaaagatgagcaggggaggctcctttgtgaacttttcattagggcaccgaagcgaaga
aatcagccagattattatgaagtggtttctcagccaatcgatttaatgaaaatccaacaa
aaactaaagatggaggaatatgatgatgtgaatttgctgactgccgattttcagcttctc
tttaacaatgcaaaggcttactataagcctgattctcctgaatataaagctgcctgcaaa
ttatgggagttgtatttgcgcacaaaaaatgaatttgttcagaaaggtgatgctgaggag
gaagacgaagatgaggaaggacatgacaatcaaggcgcaaattctgaattatcatctcca
ggttacctgaaggaaattcttgaacagcttcttgaagctatagctgttgccacaaaccca
tctggacacctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagat
tattatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaat
ggaacttataaaagcattcatgcaatggccaaggatatagatcttctggcaaagaatgcc
aaaacctacaatgagcctggatcacaagtattcaaggatgcaaatgcgattaagaaaata
tttaatatgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatc
aggactccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggc
agtgtcggtgatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaa
ggggatcgtttatcagcaataaccatggcattgcaatatggatcggaaagtgatgaggat
gcagctttggctgctgctgctcgttatgaagagggagaatctgaagccgagagcattact
tccttcatggacacttctaatcctctttatcagctttatgacacagttagaagttgccga
aataatcagggccagctcatatctgaacccttttttcacttgccctccaagaaaaagtat
cctgattattatcagcaaattaaaacacctatttcattgcagcaaatcagaaccaaactg
aagaaccatgaatatgaaactttagatcagttggaggctgatctgaacttgatgtttgag
aacgccaagcgctacaacgttcccaattctgccatttacaagagagtactgaaaatgcaa
caggttatgcaggcaaagaagaaggagcttgctaggagagatgagattgaggatggggac
agtatgatttcttctgcaacatctgatactggaagctcgaaaaggaaaagtaaaaagaat
atacgaaagcaacgaatgaagatcttatacaatgcagttctggaagctcgagaatcgggc
acgggcagacggctctgtgatctgtttatggttaaaccatccaaaaaggactatccagac
tattataaaattatcttggagcccatggacttgaaaatgatagaacacaacatccgcaat
gataagtatgcagcggaagaagccatgatagaagacatgaagctcatgttccgaaatgca
aggcattataatgaggagggctcccaggtatacaatgatgcccatatgctggaaaagatc
cttaaagaaaaaagaaaagaactgggacccctagctgaagatgatgatgttgcatcccct
aaactaaagctaagtagaaaaagtggcatttctcctaaaaaatcaaaatacatgactcca
atgcaacagaagttgaatgaggtgtatgaagcagttaagaattacacggataaacgaggc
aggcggctgagtgccatcttcttgaggctaccatctcggtctgaacttcctgactattac
gtaaccattaaaaagcccgttgacatggaaaagatcagaagtcatatgatggcaaataaa
taccaggatattgattccatggtagaggactttgtaatgatgttcaataatgcttgcaca
tataacgagccagaatctttgatttataaagatgctctggtcctgcataaagttttgctt
gaaactcggagagagatagaaggagatgaggattctcatgtgcccaatgttactttgcta
attcaggaacttatccataacctttttgtatctgttatgagccaccaggatgatgagggc
agatgctacagtgactccttagctgagattcctgagattcatgctgttgatcccaacttc
ccaaataaacctcccctgacttttgatattatccgaaaaaatgttgaaaataatcgctat
agaagattggacttgttccaggagaatatgtttgaggtactggagagggcaaggagaatg
aacaggactgattcagagatttacgaggatgcggtggaacttcagcagttctttattaaa
attcgagatgaactttgtaagaacggagagattcttctgtcacctgctctcagctatacc
accaagcatcttcacaacgatgtagaaaaggaaaagaaggaaaagctgcccaaagaaata
gaagaggataagctcaaaagagaggaggagaagagagaagcggaaaagagtgaagattca
tctggatcagctgggctgtcaagtttacatcggacctacagccaggactgcagcttcaag
aacagcatgtaccatgtaggagattatgtgtatgtggagcctgctgaagccaacttgcaa
cctcacatagtctgtattgagaggctgtgggaagattcagctggtaaggataaagaagtt
tttaaaagcgactattacaataaagttcctgttagcaaaattttaggcaagtgtgtagtc
atgtttgtcaaggaatattttaaattgtgtcctgaaaacttcagagatgaggatgtctat
gtctgcgagtcgcgttattctgcgaagacaaaatcttttaaaaagattaaactgtggact
atgcctgtaagctctgtaagatttgtcccacgagatgtgcccctgcctgtggtccgtgtt
gcttctgtgtttgccaatacagacaaagtagatgaggacaaacacgctgaaacattggag
gacggtaagatgggagagagtatccttcatcttgaaaaggacaaagaagatgttccggta
gaaatgtccaatggagaacctggttgccattactttgaacaactctgctacaatgatatg
tggcttaaggttggagactgtgtcttcataaagtcacatgggttagtgcgacctcgggtg
ggaagaattgaaaagatgtgggtgcgagatggagctgcatatttctttggtccgatcttt
atacatcctgaagaaactgaacatgaaccaactaaaatgttctacaagaaagaagtgttt
ttgagtaacttggaggagacctgtccaatgacttgcattttgggaaagtgtgctgttctg
tcattcaaggacttcctctcctgcagaccaacagaaatctctgaaaacgatgtttttctt
tgtgagagccgctacaatgaaagcgacaaacaaatgaagaagtttaaagggctgaagagg
ttttcactctctgcaaaagttgtagatgatgaaatatactattttagaaaacccatagtt
cctcagaaggaaccgtctccactactggaaaagaagattcagcatctagaagcgaaattt
gctgagttggaaggaggagatgaggacatggaagagatgggagaagaggaaggtgagtcc
actcccaagtctgttaagggcagcaccaagaaggagggatcaaaaaggaagatcaacatg
agtgggtacatcttatttagcagcgagatgagagctgtaattaaagctcagcacccagac
tactcctttggagagctcagcaggcttgtaggaactgaatggagaaacttggaagcaaca
aagaaagcagaatatgaaggcatgataagtggctatccaccggtgctgccacctttgcag
ggcccagttgatggcattgttagcatgggcagcatgcagccacttcacccaggggtgccc
ccaccccaccaacttccgccaggtatgccaggcatcccaggcatcccaccacccggtgtt
ataggccaaaatgtgccccccatagtaggcactccagcacccggagcaagtcctttcgga
cagcagataggaatccttggcccgccgggacagcaggcaccccctccgtatcccggccag
agcccagcgagtcagccagttatgcagcagcccacaacgcccatgttcgtctcccctcca
ccaaagacacagaggcttcttcattctgaagcctatctgaaatacattgaggggcttagt
gctgaatcgaatagtattagcaagtgggaccagacccttgcagcacgaagacgagatgtc
cacttatcaaaagaacaagagagccgactcccttcacactggttgaaaagtaaaggggct
cataccacaatggccgatgcattgtggcgtctgcgagacttgatgctgcgagacaccctt
aatatccgtcaggcatacaacatagaaaatgtttag
DBGET
integrated database retrieval system
