Opisthocomus hoazin (hoatzin): 104338405
Help
Entry
104338405 CDS
T08436
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oha03009
]
104338405
03036 Chromosome and associated proteins [BR:
oha03036
]
104338405
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104338405
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
Helicases
104338405
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104338405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
DUF3098
Motif
Other DBs
NCBI-GeneID:
104338405
NCBI-ProteinID:
XP_009942746
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MARKEKKEKKSKHRDRSRSRKAQTDESEQSEEDDSPKLKKARSRVKQNGHAREESPENAG
LSSLNSKSTHKKQHSNSSETSSGEGDSEQEQEMTEEQKEGAFSNFSISEGTVQLLQARGV
TYLFPVQVKTFNPVYSGKDVIAQARTGTGKTFSFAIPLIEKLQGDSQERRRGRSPKVLVL
CPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQSG
KLDLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVA
KKYMKSRYEQIDLIGKRTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCE
TKKEANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGTFKVLVATNVAARGLDIPEV
DLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEHQLRYVEQKAGITFKRVGVP
TATDIIKASSKDAIRCVWXLKSCCIFPVQKGCLDSLLPFLVSDKCAEAYSSDRMEHAPLF
TLXGFVTMILRCSEEINNMSYAWRRLRELLGDDVDRKVNRMCFLKGKMGVCFDIPAAYQK
ETESKWEDSKQWRLCVATELPELVESLRGGGGGNGRSFSSSRSGRRGGSGRNRFRSRGQK
RSFDRAFDR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaaggagaaaaaagagaagaagtccaaacaccgtgacagatctcgaagcaga
aaggctcagactgatgaaagcgagcagtcggaagaggacgattccccaaaactgaagaaa
gcgaggagtcgagttaaacaaaacggtcatgcgagagaagaaagcccggagaacgcggga
ttatcttccttaaacagtaaatccacccacaaaaaacagcacagtaattctagtgaaaca
tctagtggcgaaggtgacagcgagcaggagcaggagatgacggaagaacagaaagagggt
gctttctccaatttttctatttcggaaggaaccgttcagcttcttcaagctcgaggagtg
acgtacctgtttcctgtgcaagtgaagaccttcaacccagtatattctggcaaagatgta
attgctcaagcacgaactggaacagggaaaacgttctcttttgctattcccttaattgaa
aagcttcagggagactcacaggaaagaagaagaggccgttcaccaaaggtactagttctt
tgtccaacaagagagctggcaaaccaggttgccaaagatttcaaggacatcacaagaaag
ctaacagtagcttgtttctatggaggaactccatataatggacaaattgatctcatgaga
agtggcattgacattttggttgggacacctggtcgaatcaaagaccatcttcagagtggc
aagctggaccttaccaaggtgaaacatgttgtacttgatgaagttgaccagatgctggac
atgggatttgctgagcaagtggaagacattttacgagttgcatacaagaaggattctgaa
gacaatccccagacgctactgttttctgcaacttgcccacactgggtctatgatgtggct
aagaaatacatgaagtctagatatgaacagattgacctgattgggaaaagaactcaaaag
gctgctacaacagtagaacatttggcaatagagtgtcactggtctcagagagctgccgtt
attggggatgtcattcaggtctacagtggcagccacggcaggaccatcgtcttttgtgag
accaaaaaggaggcaaacgaactggctctgaatgcttcaatcaaacaggattgccagtcg
ttgcatggtgacattcctcagaagcaaagagagatcacactgaaaggttttaggaatggt
acatttaaagttctggttgccaccaacgtagctgcccgtggtttagatatccctgaagtt
gacctggttgtacaaagttcaccaccaaaggatgtggagtcctatatccatcgttctgga
cgcacaggtcgagctggacggactgggatctgtatctgtttttatcagcgaaaggaagaa
catcagttaagatatgtggaacaaaaagcgggcattacattcaagcgtgttggagttcct
actgcaacagatataataaaggcttccagcaaagatgctatcaggtgcgtttggtgactc
aagtcctgttgtatattcccagttcagaagggctgtttggattccctgttgccgtttctc
gtgtctgataaatgtgctgaagcttattcctctgacagaatggagcatgccccacttttt
actctttagggtttcgttacaatgatactacgctgctctgaagaaataaacaatatgagc
tatgcttggcgaagactacgagagctgttgggtgatgatgttgacaggaaggtgaacaga
atgtgtttcctcaagggaaaaatgggtgtgtgctttgatattcctgcagcataccaaaag
gaaacagagtcaaaatgggaagattcaaaacagtggcgtttgtgcgtggcgactgagtta
cctgagttagttgaatcactgcgaggaggaggtggaggaaatggccgaagcttctcaagc
tccaggagtgggcggcgtggtggctctggtagaaacagattccgaagcagaggccagaaa
cgaagttttgacagagcctttgatcgctaa
DBGET
integrated database retrieval system
