Opisthocomus hoazin (hoatzin): 104338592
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Entry
104338592 CDS
T08436
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104338592 (RC3H2)
04121 Ubiquitin system [BR:
oha04121
]
104338592 (RC3H2)
Transcription factors [BR:
oha03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104338592 (RC3H2)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104338592 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104338592
NCBI-ProteinID:
XP_009942988
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEAAGKMVPSANGIANLESGVPQLIPRCADTSLRALENSKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVNLFEAQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST
SSARYVERDRFVVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
TCFSQPITTSVSKASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagcaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaaaccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacgctggtgaactgt
cagctggtggaggaagagggtcgggttagagccatgagggcggctcgatcgctgggagag
agaaccgttacagaactgatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctccgcactctcgagaaaagttctggta
ctttttgttgtacaaaggctagaaccaagatttcctcaggcctctaaaacgagcattggt
cacgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaggagtttcggagttacgaggctttgcggagagagcac
gatgctcagattgttcacattgccatggaagcgggacttcgaatatcgccagaacaatgg
tcttcccttctttacggtgacttggcacataagtcacacatgcaatccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctgctggcaaacata
gatccaaatccagatgcagcgtctccaacatgggagcagcttgaaaatgcgatggtcgct
gtaaagactgtggtacatgggcttgtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaacagcaaatataaaacaagtatgtgcagagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaattagtgcgacagtgagaacgttccccctgcta
aataaagttggtgtaaatagcaccgtctccaccacaacaggaaacgtaatttctgtcata
ggaagccctgaagcagcagggaagatggtgccaagtgctaatggaatagctaatctagaa
agtggtgttccccaattgatccctcgctgtgcggacacctccttgagagctttggagaac
tccaagaagggagggaagactggagccaatggccagaatgtttctggatcccctacagaa
tcactacctgaaaataaaatcggttctccacccaagactcccgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagggtacctgtctaccctccacattctgataacgttcagtatttccag
gatcccaggactcagctgtcgtatgaagttccacagtacccgcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcgttacgtgagagatacaactctttggatgga
tattactctgtggcttgtcaacctccaaatgaacagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagttaagacggaagccggagcaatgg
gcacagtaccacacgcagaagactcctctggtatcatcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagcggggatgttaaaaggagagtgaat
ttatttgaagctcagagaagggccaaggaagaagatcctataatcccatttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca
gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcagattctact
tcatcagcacgttatgtggaacgggacaggtttgtagttacagatttgtctggtcacaga
aagcattccagcactggagatctgttgagtattgaattacagcaggccaaaagtaactcg
ttactacttcagagagaggcaaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgtctcaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatactgaagactgtgcagacacaaagccagatcgggacatt
gaattggagctgtcagcccttgatacagatgaacctgatgggcaaggagaacaaatagaa
gagattctggatatacagctaggtattagttctcaagatgatcagctgctcaatggaact
actgtagagaatgggcatccactaaagcagcaccagaaagaatctatggaacagaagaga
caaagcttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
acttgcttcagtcagccgatcacaacatctgttagcaaggcaagctgcctgcccatcagc
acgtcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
