Oncorhynchus keta (chum salmon): 118357682
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Entry
118357682 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118357682
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118357682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_10
DUF4407
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118357682
NCBI-ProteinID:
XP_052333632
EnsemblRapid:
ENSOKEG00005007389
LinkDB
All DBs
Position
24:10987995..11012149
Genome browser
AA seq
724 aa
AA seq
DB search
MADTELKPESKPDQKLCCTVCSSALNGDKSSTCGHLVCDSCLGKKSKGCPQCLQCSGKPI
PASVEQNGTMIEIVAESPLVIKTEEREKRDLKESEDPKTPEDAMIQKDLKESEDPKTPED
AMIQEDLKESEDPKTPEDAMIQKDLKESEDPKTPEDAMIQEDLKESEEEKNKEIDPPQPA
EEVKEDVGVGERDTLREEKAKGEVKVEPLGPDDVVCDSCMEMSPCRALKSCLTCLVSYCE
AHLRPHLENPKFQNHRLVEPLRDIERRTCETHKWPLDLFCCADAVCVCQDCVTEDHRGHN
TVPVMEARRNIERELLDKQAEMVRTMTAAENAINKLQVNTVSIENSVTEVREVIENQFTV
LQAAVERAKREVTEILEGEEKQALRQADGIKVHLEQRCTELKKTQAQMEKLSKNKNDVDF
LQEYSEWKKDCSDIPLPGVYIGLVDRLNSFSREIVTSTQELCEVQLSNYIESLKETCKND
MMGIKTTVHEIIAAKQNMDVPDPETREDFLKYANPVSFDADTAHKFLRLTEENRKVTNTT
PWQHPYPDVPERFESWRQVLATESFYVGRHYFEVDVSGEGTYVGLTYKSIDRKGPESNSC
ITGNDFSWCLQWNGRSFSAWHGDVETPLSVDKFTRIGVYVDYSRGLLAFYGVDDVVGMTL
IHKYQAEFLEPLYPAFWLSKKENVVVLVEPGEPLTLKSPSLPKIPLNTDAAPQSRFTVTL
VVEQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaactcaaaccagagtcaaaaccagaccagaaactctgctgcactgtt
tgttccagtgctctcaatggtgacaaatcctctacctgtggccacttagtctgtgactcc
tgcctgggcaagaaaagtaagggctgcccccagtgtttacaatgctctggcaagcctata
ccggcatctgtggaacagaacggaacgatgattgaaatagtggctgagtctccactggtg
atcaaaaccgaagaaagagagaaaagggatctgaaggaatcagaggaccctaagacacca
gaggatgcaatgatacagaaagacctgaaggaatcagaggaccccaagacaccagaggat
gcaatgatacaggaagacctgaaggaatcagaggaccctaagacaccagaggatgcaatg
atacagaaagacctgaaggaatcagaagaccccaagacaccagaggatgcaatgatacag
gaagacctgaaggaatcagaggaagagaaaaataaagagattgatcctccacagcctgca
gaggaagtgaaagaggatgtgggggttggggagcgagacacattaagggaagagaaagca
aaaggagaggtgaaagtagagccgttggggcccgatgatgttgtgtgtgactcgtgtatg
gagatgagcccgtgccgggccctcaagtcctgcctcacctgccttgtgtcctactgcgag
gcccaccttaggcctcacctggagaaccccaagttccagaaccacaggttggtggagccg
ctgagggacatcgagagacggacctgtgagacccacaagtggcccctggaccttttctgt
tgtgccgacgctgtgtgtgtctgtcaggactgtgtgacagaggaccacaggggacacaac
actgtgcctgtgatggaggcacgcagaaacattgagagggaactactagataagcaagca
gagatggtgaggacaatgacagcagcagagaacgccatcaacaaacttcaagtcaacacg
gtctctattgagaattcagtgacggaggtccgtgaggtgattgagaaccagtttacggtg
ctccaggctgcggtggagcgggccaagagagaggtgacggagatcctggagggagaggag
aagcaggctctgagacaggccgatgggattaaggtacacctggagcagaggtgcactgag
ctgaaaaagacacaggcgcagatggagaagctctccaagaacaagaatgatgtggacttc
ttacaggagtactccgagtggaagaaggactgctccgacatccccctacctggggtctac
atcggcctcgtggaccggctcaactccttcagcagagagattgttacctccacacaggag
ctgtgtgaggtgcagctgtccaactacattgagtcactcaaagagacctgcaaaaatgac
atgatggggattaaaaccacagtccatgaaataatcgcagccaaacagaacatggacgtt
ccagacccagagacgcgggaggactttctaaagtatgccaatcctgtgagttttgatgcg
gacacggcccataaattcctgcgtctgactgaggaaaacagaaaggtgaccaacaccaca
ccctggcaacacccgtaccccgacgtccctgaacgttttgagagctggcgacaggtactg
gccacagagagcttctatgtcggccgacactacttcgaggtggacgtgagcggcgagggc
acgtacgtcggactcacctacaagagcatcgaccgcaagggtcctgaaagtaacagctgc
atcaccggcaatgacttctcatggtgcctccaatggaacgggcgtagcttctctgcctgg
cacggtgatgtggagacgcctctaagcgtggacaagttcacacgcattggggtctatgtg
gactatagccgtggattactggctttctacggggtggatgacgtcgtcggcatgaccctc
atccacaaataccaggctgagtttctggagcccctctacccagccttctggctgtcgaag
aaggagaacgtggtagtgcttgttgaacctggagagccgctgacactgaaaagcccctct
ctccctaaaatacctcttaacactgacgcagcaccccaaagccgtttcactgtaactctt
gttgttgaacaatga
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integrated database retrieval system
