Oncorhynchus keta (chum salmon): 118359343
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Entry
118359343 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118359343
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118359343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
ALIX_LYPXL_bnd
Prok-RING_4
MAP65_ASE1
Spc24
Motif
Other DBs
NCBI-GeneID:
118359343
NCBI-ProteinID:
XP_035593754
EnsemblRapid:
ENSOKEG00005044945
LinkDB
All DBs
Position
26:complement(37555504..37560416)
Genome browser
AA seq
555 aa
AA seq
DB search
MAQQAVLLDQDQFCCSVCLDLLKEPITIPCGHSYCRSCIEGCWDQDVLKGYSCPQCRQTF
TPRPTLRKNNMLAEVVEKLKKTGLQAAPPPALCYAEPVDVACDFCTGTRKQKALMSCLAC
LASYCETHLQSHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTMD
EHKGHDTVSASAERTEKQRQLGMSQQKVQQRFREREKELKELQQAVESLKHSAQAAVEDS
EKIFTELIRSIERRCSEVKELIRAQEKAQVNQAEGLLEQLEQEVAELRKRSTELEQLSHT
EDHITFLQHYQALSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIST
TVNIVEVVLPPEPKTREQLLQYSCQLTLDPNTAHTRLSLSKGNRKVTYTGQVQPYPDHPD
RFTNDLMVLCREGLSGRCYWEVEWSGRWVIISVSYKDISRTVRGNAFGLNDKSWSLQCSS
GGYCFRHNHVVTKASGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGV
WLNSDNGTAELVKLY
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaggcagttctgctggaccaggaccagttctgttgttctgtctgcctggat
ctactgaaggaaccaatcaccatcccctgtggacacagttactgtagaagctgtattgag
ggctgctgggatcaggatgttctgaaaggctatagctgtcctcagtgcagacagaccttc
actccaaggcccactctgaggaaaaataacatgttggctgaggtggtggagaaactgaag
aagacaggactccaggctgctccccctcctgctctgtgctatgctgaacctgtagatgtg
gcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcgtgt
ctggcctcttactgtgagactcacctccaatctcactatgaatctcctgctttcaagaag
cacaagctggtcaaagccaccgcacaactacaagagaagatctgctctcatcatgacaaa
ctgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatggat
gaacataaaggccatgatacagtgtcagcttcagcagagaggactgagaaacagaggcag
ctggggatgagccagcagaaggtccagcagagattccgggagagagagaaggagctgaag
gagctccaacaggctgttgagtctctcaagcactctgcacaggcagcagtggaggacagt
gagaagatcttcactgagctgatccgctccattgagagaaggtgctctgaggtgaaggag
ctgatcagagcccaagagaaggctcaagtgaatcaagctgaaggactcctggagcaactg
gagcaggaggttgctgagctgaggaagagaagcactgagctggagcagctctcacacaca
gaggatcacatcactttcctccagcattatcaggctctctccagtattagtgtatcttca
gacttacccagcattgttgtccgtccacttcagtactttggagatgtgagtaagactgtg
tctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctccact
acagtgaatatagtggaggttgtactgcctccagagcccaagaccagagaacagttgtta
caatattcctgtcagctcacactggacccaaacacagcacacacacgcctctctctgtct
aaagggaacagaaaggtgacctatacaggccaagtccaaccatatcctgatcatccagac
agattcacaaatgacttgatggtgctgtgtagagagggtctgtctggacgctgttactgg
gaggtggagtggagtggacggtgggttattatatcagtctcatataaagacatcagcaga
acagtgagaggtaacgcatttggattgaatgacaagtcctggagtttacaatgctctagt
ggtggttattgtttcagacacaatcatgttgtgactaaagcatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgacgctcctccacagagtccagaccacattcactcagccactctatcctggggtt
tggctcaatagtgataatggtactgctgagctggttaaactgtactag
DBGET
integrated database retrieval system
