Oncorhynchus keta (chum salmon): 118359786
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Entry
118359786 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118359786
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118359786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_11
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
118359786
NCBI-ProteinID:
XP_035594414
EnsemblRapid:
ENSOKEG00005038626
LinkDB
All DBs
Position
27:complement(30629297..30636448)
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AA seq
613 aa
AA seq
DB search
MASKLWTKEEISCPVCLNTLTEPTTLPCGHNFCLDCIRKCWDESGSISSRSNAVSCCPYC
RETFRLRPTLTKNSILEKMVEKLKTTLLDTSPGYVYDGPEDVVCDVCTLLGSGRKAKAVR
ACRECKLSYCQSHLRAHLDILLLQKHTLVGVVVKELQLEKLCPQHDKPLDLYCRLERRCI
CSLCAVEEHKSHQTVSAETERAKKQALLAVEQIKSNSKLQMKEELLTQLGDAAGSLKGFA
QAAVEVSDMIFVELIHSLEKRRAEVRDSIKDREKTLAAQAARAETRLRQDITILQRRNSD
LEKLAQTQDSILFLQRWQPISLLPDREPSVISERHSFGAVMSIITEFKELLKDMNVDFLE
KIKQAVANVDILESPVPMTKPQGRQVRRAHSECQPMPPVPLQKAWSISRDFTFGIPKTRP
DFLHYAFQLTLDTDTAHRNLCFSDQNRKVTLVKSRGQSRTRSRLPKTFDFWEQVLCWEGL
TGSRYYWEADWRGKGVFIGVTYESIQRGGRGLACGLGYNVKSWSLQCSDTSYSAWHDNIE
TKITAKVSSPRIGVYLDHKAGILSFYSISDSSMILLHSFLSEDFSEPLYPGFGVGVQSSL
ILCQLGRQRQLRT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaagctgtggacaaaggaggaaattagctgtccagtctgtttgaacacccta
acagagcctacaactcttccatgtggacacaacttctgcctcgactgtatcagaaaatgc
tgggatgagagtggtagtatcagcagcagaagcaacgcggtttcctgctgtccttactgt
cgagagacattcagattgcgccccacactgactaagaactcaatactggaaaagatggtg
gagaagctaaagactactttactcgatacctctcctgggtatgtgtacgatgggcctgaa
gacgtggtgtgtgacgtgtgtactcttctagggtccgggaggaaggcaaaggctgtgagg
gcctgtcgggagtgtaagctgtcctactgccagtctcaccttagagcccacctggatatc
cttctgttacagaagcacactctggtgggtgtggtggtcaaggagctgcaactggagaag
ctgtgtccccagcatgacaaaccgctggacttgtactgcagacttgagaggaggtgtatc
tgttctctgtgtgcagttgaggaacacaaaagccaccaaactgtctccgctgagactgaa
cgggccaagaaacaggcactgttggcagtggaacagatcaaatccaacagtaaactccag
atgaaagaggagctgctgacacaactgggagatgctgcgggatctcttaaaggatttgca
caagctgcagtggaggtcagtgacatgatcttcgttgagctgatccactccctagaaaag
aggagagcagaggtgagggactccatcaaagatagggagaagactctggctgctcaggca
gcaagagcagagacacgactgagacaggacataacaatactgcaaaggagaaacagcgat
ctggagaaactcgcccaaacacaagacagcatactctttctccagaggtggcaacccatc
agcctgctgccggatcgtgaacctagtgttatcagtgaaagacattcatttggagctgtg
atgtcaattatcactgaattcaaggagctgcttaaggacatgaatgttgacttcttagaa
aagattaaacaagcagttgcaaatgtggacattttggaatctccagtacccatgaccaaa
cctcagggcaggcaagtgagaagagcccattctgaatgccagccaatgccaccggtgcca
ttgcaaaaagcatggagcataagcagagatttcacatttggaattcctaagaccagaccc
gacttcttacactatgcttttcaactcactctagacactgatacagcacaccgcaacttg
tgcttctctgaccagaaccgcaaggtgactctggtcaagtccagaggtcaatccaggacc
aggtcacgtctcccgaagacctttgacttctgggaacaagtgctgtgctgggagggcttg
accggttcccgttactactgggaggcagattggagaggcaaaggagtgttcattggagtg
acctatgagagcattcagaggggaggcaggggactagcgtgtggcctggggtacaatgta
aagtcatggagcttacagtgctctgacaccagttactcagcatggcacgataacattgaa
accaagatcactgccaaggtctcatcccctagaataggggtttatttagatcacaaagca
ggaattctgtctttttacagcatatctgactcctccatgattctgctccatagttttttg
tcagaggacttctcagagccactgtatcctggttttggtgttggggtacaatcctcgttg
atactttgccaattggggagacaacgacaattgaggacatag
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