Oncorhynchus keta (chum salmon): 118359995
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Entry
118359995 CDS
T09424
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118359995
03015 mRNA surveillance pathway
118359995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118359995
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118359995
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118359995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118359995
NCBI-ProteinID:
XP_035594875
EnsemblRapid:
ENSOKEG00005045929
LinkDB
All DBs
Position
27:39225038..39230012
Genome browser
AA seq
485 aa
AA seq
DB search
MATDSWALAVDKQEASTDSFGSLVIRSLPRGGGDAAPNKAKKGTTKQVENDTNVEGEEKE
DKAAQSLLNKMIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKDKLLKGVYDMGFNR
PSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWAQCLCIAPTYEL
ALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGAKLQEQIVIGTPGTVLDWCSKLKIINPK
KISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFAERVVPDPNI
IKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRRTAGWLATELT
KEGHVVALLSGEMTVEQRATIIERFREGKEKVLVTTNVCSRGIDVEQVSVVINFDLPMDK
DGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFNKKINKLDTDDLDEI
EKISN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctactgactcttgggcccttgctgtcgataaacaggaagcttcgactgactcattc
ggctccttggtgataagatctctacctcgaggtggaggtgatgctgcacctaataaggca
aaaaaaggtaccacaaagcaagtggagaatgacaccaacgtcgaaggggaggaaaaagag
gacaaagcagcccagtcattgttgaataagatgatccacaccagccttgtgaacactacc
aatcaagtagaggttcttcagagggatcccaactctcctctttactcggtcaagacattt
gaagagctgaggctgaaagataagctgctgaagggagtgtatgacatgggcttcaacaga
ccctctaagatccaggagaatgccctgcccatgatgctggcagagccacctcagaacctg
attgcccaatcacagtccggtacaggtaaaacagctgccttcgtgctggccatgctcagc
catgtcgacccaactaacaaatgggcacagtgtctttgcattgccccaacgtacgagcta
gctttgcagactggtaaagtcattgagcagatggggaaattctatcctgaggtcaaattg
gcatatgccattcgtggcaataaattggaccgaggggcgaagcttcaggagcagattgtc
atcgggacacctggcacggtcttggactggtgctccaaactgaagatcatcaaccccaag
aagatcagcgtctttgtcctggacgaggctgatgtcatgatcgccacacagggtcaccag
gaccagagcatccggatccaaagaatgttgccaaaggaatgtcagatgctgctgttctct
gccacctttgaggactctgtgtggaagtttgctgagagggttgtgccagaccccaacatc
atcaagctgaaacgtgaagaggagactctggacaccatcaagcagtattacgtgctttgc
agcgacaaggaggaaaagtttacagcactctgtaatatctacggcgccatcaccatcgcc
caagctatgatcttctgtcacacccgaaggacagctggctggctggctacagagctgacc
aaggagggccatgtggtggcgctgctgagtggggagatgactgtggaacagagagcgacc
atcatcgaacgcttcagggagggcaaggagaaggtcctggtgaccaccaacgtatgctcc
agaggcattgatgttgagcaagtttctgtggtgataaattttgacctgcccatggacaaa
gacggaaacgccgacaacgagacataccttcaccggattggtcgcacaggacgtttcggc
aagaggggccttgcagtcaatatgattgacagcaaacacagcatgaacattctcaaccaa
atcgaggaacatttcaataagaagatcaacaagcttgacactgatgatctcgatgaaatc
gagaaaatcagcaactag
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