Oncorhynchus keta (chum salmon): 118360306
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Entry
118360306 CDS
T09424
Name
(RefSeq) plexin-A1-like
KO
K06820
plexin A
Organism
oke
Oncorhynchus keta (chum salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
TIG_2
TIG_plexin
PSI
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
118360306
NCBI-ProteinID:
XP_052338544
EnsemblRapid:
ENSOKEG00005042646
LinkDB
All DBs
Position
27:complement(32076289..32446842)
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AA seq
1873 aa
AA seq
DB search
MICHPTPSLGGPLLPFLLLLSGVLATIPSNLRTFSPPEGGLTHLVVHNKTGEVYLGAVNW
IFKLSSNLTKLRNHVTGPVVDNEKCYPPPGVQSCPHELAQTNNVNKLLLLDYGQNRLIAC
GSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVAEAGTMSGVVIGGDAAGGGGGAGKLFV
GTPIDGKSEYFPTLSSRKLMANEENADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDIYYI
YGFSSEQFVYYLTLQLDTQLTSPDASGEQFFTSKIVRLCVDDPKFYSYVEFPIGCTKDGV
EYRLVQDAYLSRPGTKLARSLGISEQDEVLFTVFAQGQKNRAKPPKESALCLFTLRRIKE
KIKERIQSCYRGEGKLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTSTIEGLPLF
VDKDDGMTSVAAYEYHGHTVAFTGTRSGRIKKILVNSINHPAMLYENGVVSEGSPIHRDL
LFSPDYQHIYALTDKQVSRVPVESCEQYSSCSGCLGSGDPHCGWCVLHNVCSRKDRCERA
DEPQRFASRVEQCVKLSVQPGNISVTMSKVQLVLQAQNVPNLSAGVNCSFEDYTETEGRI
FGGRIYCLSPSTREVAPITRNQGDKRTVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSC
VNGSFPCHWCKYRHMCTQNANDCSFQEGRVNVSEECPQILPSTQIYIPVGVMKPITLLAK
NLPQPQSGQRNYECIFHIQGATYSVTALRFNSTSIQCQRTSYDYEGNDLSDLPVDLSVVW
NENQVIDDPFNIQAHLYKCYALRDSCGMCLKADPRFECGWCVQEKKCSLRQECAPLDSSW
MHPTAGNSRCTHPKITKLFPETGPRQGGTRLTITGENLGLQFRDILTGVRLGKVPCIPIE
EEYISAERIVCLLNDATGYRVQEANVEVCVRDCLTDYRALSPRAFTFVTPFFTRVLPAQG
PLSGGTRVTIEGNHLNAGSSVFVNIGRHPCHFKKRNAREIVCVTPAGLTPGSTPVMVDID
SAELRNPEVKYNYTDDPTVLRIEPDWSIASGGTLLLWNTGLQTLGLGGTLNCTVFNNSVM
VCLAPSVTDSERGFSDTGSGPDEIGFYMDNVHALVVVNETFSYYPDPVFEPLSPTGVLEL
KPTSPLILKGRNLIPAAPGNSRLNYTVFIGETPCVLTLSETQLLCEWPNLTGQHKVTIRV
GGFEYSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLVIIAVLIAYKRKSRDADRTLKRLQL
QMDNLESRVALECKEAFAELQTDIHELTQELDGAGIPFLEYRTYAMRVLFPGIEDHPVLK
EMEVQANQEKALTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEY
ATGVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFM
LYCAMKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLTLHCMNPENENASEVTVKGL
NCDTITQVKEKLLDAVYKGSPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKR
LNTLAHYQVTDGSVIALVPKQNSAYNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMI
TPDLESGTKLWHLVKNHDHSDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFS
TAHRGSALPLAIKYMFDFLDEQADKHSISDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDI
HKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKNWVERYYSDISRM
PAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIVKYKDEILSALQKDEQSRRQRLRS
KLEQVIDTMALAS
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgatctgccaccccaccccatccctgggaggccctctcctacccttcctcctcctgttg
tcaggggtgttagccaccattcccagcaacctcaggacattctcccctccagaggggggg
ctcacacacctggtggtccacaacaagacaggtgaggtgtatctgggagccgtcaactgg
atcttcaagctgtccagcaacctgaccaagctccgcaaccacgttacaggccctgtggtg
gacaatgagaagtgttatccccctccgggtgtccaatcctgcccccatgaactggcccag
accaataacgtcaacaagctgctgctgctggactatggtcagaaccgcctgatcgcctgt
ggcagcacctcccaaggaatctgccagttccttcggttggacgacctgttcaagttgggt
gagccgcaccaccgtaaggagcactacctgtccagcgtggccgaggctggcaccatgtct
ggggtagtcatcggtggagacgcggccgggggcgggggaggagctggcaagctgtttgtg
ggcacgcccatcgacggtaagtcagagtacttccccacgctctccagccgcaagctgatg
gccaacgaggagaatgccgacatgttcagcttcgtctaccaggacgagtttgtctcctcg
cagctcaagatcccctcggacacgctctccaagttccccgccttcgacatctactacatc
tacggcttcagcagcgagcagtttgtctactatctgaccctgcagctggatacccagctc
acttcgcccgacgccagcggggagcagttcttcacctctaagatcgtccgtctctgcgtg
gacgaccccaagttctactcctacgtggagttccctattggctgcaccaaggacggggtg
gagtatcgtctggtgcaggacgcctaccttagccgacccgggaccaagctggcgcgatct
ctgggcatctcagagcaggacgaggtgctgttcacggtgttcgcccagggccagaagaac
cgggccaagccccccaaggagtcagccctgtgcctgttcacgctgcgccgcatcaaggag
aagatcaaggagcgtatccagtcctgctacaggggagaggggaaactgtcactgccctgg
ctgctcaacaaggaactagcctgcatcaactcaccgcttcagatagatgataacttctgt
gggcaggacttcaaccagcccctgggaggaaccagcaccatcgagggtctgcctctgttc
gtggacaaggacgatggcatgacctcggtggcggcctacgaatatcacggccacaccgtg
gcctttaccggcacacgcagcggacgcattaagaagatcctggtgaattctatcaaccat
cctgccatgctgtatgagaatggggtggtgagcgaggggagtcccatccacagagatctg
ctcttcagcccagactaccagcacatctatgccctcacagacaaacaggtgagccgtgtt
ccagtggagagctgtgagcagtactcctcctgcagcggctgcctggggtcaggagatccc
cactgtggctggtgtgtcctccacaatgtgtgctccaggaaggatcgttgtgagagggct
gacgagcctcagcgttttgcctcccgagtggagcagtgcgtcaaactcagtgtccagccc
ggaaacatctctgtcaccatgtccaaagtgcagctggtgctgcaggcccagaatgtgcct
aacctttcggcaggggtcaactgctcctttgaggattacactgagacagagggacgcatc
tttgggggacgcatctactgcctgtcaccttccacccgagaggtcgcccccatcacacgc
aaccagggggacaagcgtactgtgaagctgtatctgaagtctaaggagacagggaagaag
tttgccagtgtggactttgtcttctacaactgcagtgtgcaccaatcgtgtctgtcatgt
gtcaatggctcgttcccctgccactggtgtaaataccgccacatgtgcactcagaacgcc
aacgactgctccttccaggagggccgggtgaacgtgtcagaggagtgtccccagatcctg
ccatccacccagatctacatccccgtgggggtgatgaagcccatcaccctgctggctaag
aacctgcctcagccccagtctggacagaggaactatgagtgtatcttccacatccaggga
gccacctacagcgtcaccgccctgcgcttcaacagcaccagcatccagtgtcagaggacc
tcgtatgactatgagggtaatgacctaagtgacctgcctgtggatctctcagtggtgtgg
aatgaaaaccaagtcatcgacgaccccttcaacatacaagcccacctgtataagtgttat
gcgctgagagacagctgtgggatgtgtctgaaggctgaccccaggtttgagtgtggctgg
tgtgtccaggagaagaagtgttctctgaggcaggagtgtgccccgctggacagcagctgg
atgcaccccaccgctggcaacagccgctgtacacaccccaagatcactaagctgtttccg
gagacggggccgagacaggggggcaccaggctgaccatcacgggggagaacctgggccta
cagttcagggacatcctgacaggagtgcgtctgggcaaggtgccctgtatccccattgag
gaggagtacataagcgctgagagaattgtgtgtttgctaaatgatgccacgggctaccgg
gtgcaggaggccaacgtggaggtgtgtgtgagggactgcctgacggactacagggccctc
tcaccccgggcattcacctttgtgacacctttcttcactcgagtgctgcctgctcagggt
cctctctctgggggcaccagggtcaccattgagggcaaccacctcaacgccggcagttct
gtgtttgtcaacatcggacgccacccctgccacttcaaaaagaggaatgcccgggagata
gtgtgtgtgaccccagcggggctgacccctggcagcacaccagtcatggtggacatcgac
tctgcagagctgaggaacccggaggtcaaatataactacaccgatgaccccaccgtcctg
aggattgaacccgactggagcatcgctagtggtggaaccctgttgttatggaacactggc
cttcagacactgggacttggtggaacccttaactgcacagtgtttaataactctgtgatg
gtgtgcctggccccgtcagtaaccgactccgagaggggcttctcagacacgggcagtggg
ccggatgagatcggcttctacatggacaacgtccacgctctggtggtggtcaacgagacg
ttcagctactaccctgaccccgtgttcgaacccctcagccccaccggggtcctggagctt
aaacccacctcccctctcatcctcaagggtcgtaacctaatccctgcagcgcctggtaac
tccaggctgaactacacggtgttcatcggggagaccccctgtgttctgaccctgtctgag
actcagctgctgtgtgaatggcccaacctcactggacagcacaaagtcacaatccgggtg
ggtgggttcgagtactcccctggtactctccagatctactcagacagcctgctgaccctg
cctgccatcatcggtatcggaggaggtggtggtctgctgctattggtcatcatcgctgtg
ctcatcgcctacaagaggaagtcccgtgatgctgaccgcaccctgaaacgcctgcagctg
cagatggacaacctggagtccagagtggccctggagtgtaaagaagcctttgcagagctg
cagacagacatccacgagctgacccaggagctggacggagcgggcatccccttcctggag
tacaggacctacgccatgcgggtcctgttccccggcatcgaggaccaccccgtgctcaag
gagatggaggtccaggccaaccaggagaaggccttgaccctgtttggccagctcctcacc
aagaagcacttcctgttgacgttcatccgcaccctggaggcgcagcgctccttctccatg
cgtgaccgtggcaacgtggcgtcgctcatcatgacagcgctgcagggggagatggagtac
gccacaggggttctcaaacagctcctatctgacctcatcgacaagaacctggagagcaag
aaccaccccaagctgctgctgcgccgaacggagtctgttgctgagaagatgctgaccaac
tggttcacttttctcttgtacaagttccttaaggagtgtgctggggagcctctgttcatg
ctgtactgtgctatgaagcagcagatggagaaggggcctatagactccatcacaggagag
gcgcgctactcactcagtgaggacaagctcatcagacagcagattgactacaagaccctg
actctccactgtatgaacccggagaacgagaacgcctcggaggtgacggtgaaggggctg
aactgtgacaccatcacccaggtgaaggagaagctgctggatgcagtgtacaagggcagc
ccctactcccagagacccaaggctggggacatggacctggagtggcgtcagggcaggatg
gccagaatcatccttcaggatgaggatgtcaccaccaagattgataacgactggaaacgc
ctcaacacactggcccactatcaggtgacggacggctcagtgatcgctctggtaccaaag
cagaactcagcatacaacatatccaactcctctaccttcaccaagtctctcagcagatat
gagagcatgttgcgaacagccagcagtccagacagtctgcgctcccgcactcccatgatc
acccctgacctggagagtggtaccaagctgtggcacctggtcaagaaccacgaccactct
gaccagcgtgagggcgaccgcggcagcaagatggtctctgagatctatctgacccgtctg
ctcgccaccaagggtacgttgcagaagtttgtggacgacctgtttgagaccatcttcagc
acggcccaccgcggcagcgccctgcctctcgccatcaagtacatgtttgacttcctggac
gagcaggccgacaaacactccatatcagactcagacgtacggcacacctggaagagcaat
tgtcttcctctgcggttctgggtgaacgtgatcaagaaccctcagtttgtgtttgacatc
cataagaacagcatcacagacgcctgcctgtctgtggtggcccagaccttcatggactcc
tgctccacgtcagaacacaagctgggcaaagactcgccctccaacaagctgctctacgcc
aaggatatccccaactacaagaactgggtggagaggtactactccgacatctcccgtatg
ccggccatcagtgaccaggacatgagtgcctacctggctgaacagtcccggctgcacctc
agccagttcaacagcatgagtgccctgcatgagatctactcctatatcgtcaagtacaaa
gatgagatcctgtctgcgctgcagaaggacgaacagtctcgtaggcaaagactgcgcagt
aagctggagcaggtcatcgataccatggccttggccagctga
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integrated database retrieval system