Oncorhynchus keta (chum salmon): 118360999
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Entry
118360999 CDS
T09424
Symbol
srm
Name
(RefSeq) spermidine synthase
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00270
Cysteine and methionine metabolism
oke00330
Arginine and proline metabolism
oke00480
Glutathione metabolism
oke01100
Metabolic pathways
Module
oke_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
118360999 (srm)
00330 Arginine and proline metabolism
118360999 (srm)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
118360999 (srm)
Enzymes [BR:
oke01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
118360999 (srm)
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Gene cluster
GFIT
Motif
Pfam:
Spermine_synth
Spermine_synt_N
Methyltransf_31
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
118360999
NCBI-ProteinID:
XP_035596568
EnsemblRapid:
ENSOKEG00005029905
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All DBs
Position
28:complement(29789182..29796086)
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AA seq
289 aa
AA seq
DB search
MDSIKDGWFTETCTLWPGQAMSLQVEEVLYQQKSKFQDVMVFRSKTYGNVLVLDGVIQCT
ERDEFSYQEMIANLPLCSHPCPKKVLIIGGGDGGVLREVVKHPLVESVVQCEIDEDVINV
SKKYLPGMAQGFFSPKLTLNVGDGFEFMKQNQDAFDIIITDSSDPVGPAESLFKESYYEL
MKTALRDGGILCCQGECQWLHLELIKEMRTFCKTLFPVVDYAYCTIPTYPSGQIGFMLCS
KNAQTTFRDPVRELSTNEVESMNLRYYNPEIHRASFILPEFARKVLSEA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacagcataaaagacggatggttcacagaaacgtgtacgttatggcctggacaagcg
atgagtctgcaagtagaagaggttctttaccaacaaaaatcgaaatttcaagatgtcatg
gttttcaggagcaaaacctatggaaatgtacttgtgctggatggagttattcaatgcaca
gagagagatgagttttcctaccaagaaatgatagccaacctacctctgtgctcccaccct
tgccccaaaaaggtcctgattattggtggaggagatggtggcgtcctgagagaagtggta
aagcatccacttgttgaatcagtggttcagtgtgaaatcgacgaggatgtaatcaatgtg
tcgaagaaatacctcccaggtatggcacaagggttcttcagtcccaaactcactctgaat
gttggggatggatttgagttcatgaaacagaaccaggatgcctttgacatcattataaca
gattcatctgaccctgttgggcctgctgagagtttgttcaaagagtcttattatgaacta
atgaagacagccttacgagatggtggaattctttgttgccaaggagagtgtcaatggctc
cacttggagctgattaaagagatgcggaccttctgcaagacactgttcccagtggtagat
tatgcctactgcaccattcccacctacccaagtggtcagattggctttatgctgtgcagt
aaaaatgctcaaaccactttcagagatcccgtgagagaactatcaacaaatgaggtggaa
agtatgaacctgaggtattacaacccggagatccacagagcatcgttcatcctccctgag
tttgcaagaaaggtactgagtgaagcatga
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