Oncorhynchus keta (chum salmon): 118367317
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Entry
118367317 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118367317
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118367317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118367317
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118367317
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118367317
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118367317
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118367317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
118367317
NCBI-ProteinID:
XP_035606541
EnsemblRapid:
ENSOKEG00005019859
LinkDB
All DBs
Position
34:complement(55963054..55974881)
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AA seq
853 aa
AA seq
DB search
MAEVSDVLMSVLSTIRVPRPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
HTRSGQRAYLHISRTRKAPKEDDENSGSGDPPKKKPTRLAIGIEGGFNVEQEQYEEEVKV
VLFPDRQEVTSNDLATMPDVVRERVSLAMAGLMSADSVSHALQVQQWDGEVRAESRHAVE
LKQLNNGTKIPPSGWRCEVCDLQENLWMNLSDGRVFCGRRYFDGSGGNNHALLHFQQTGH
PLAVKLGTITPDGADVYSYDEDDMVLDPKLPEHLSHFGIDMMTMEKTEHTMTELEIAVNQ
RVGEWEVIQESGATLRPLSGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNIDKIF
NEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGEGSEPSSEPRGDQVGIAARMFKALV
GRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGVNPSEAFRFLVEERIVCQQSQKAKYTQ
RVDYILQLPVPMDQATNTEELQEAERRREEADSSGAPPPAPVRACIPFTACMAALSEPET
LTDFWSSAAQAKTTATKTTRFASFPDHMVIQVKKFTFGQDWVPKKLDVSIDVPDTLDLTA
LRGTGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQL
CEMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMDDPDFSAPLVLPGTSSAPGTTPTESIS
EEHLATIVSMGFSRDQATRALRATSNVLERAVDWIFSHLDDLESMEVSEGGRSAAESEGY
REPPPGPKVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPK
DLGYLYFYRRVTE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtaagcgatgttttgatgtcggttttgtctacaatccgggttccgaggccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcttctccggagagtgaagga
ggcctgtatgtgtgcatgaacagtttccttgggttcggcagccagtatgtggatagacac
cacaccaggagtggacagcgggcttacctgcacatctcccggacccgcaaagctccaaag
gaagatgatgagaactctggatccggtgacccacccaagaagaagcccacccgattagcc
atagggatcgagggagggttcaatgtggagcaggagcagtatgaggaggaagtaaaggtc
gtcctcttccctgatagacaggaagttacatccaatgacctcgccaccatgccagatgtt
gtgagagagcgggtatctctagccatggcagggctgatgtctgcagactcagtgtctcac
gccctgcaggtgcagcagtgggacggcgaggtgcgggcggagtcccggcacgctgtcgaa
ctcaagcagctcaacaacggcaccaagatccctcccagtggttggcggtgtgaggtgtgt
gacctgcaggagaacctgtggatgaacctgtcggacggaagggtgttctgcggtcgcagg
tatttcgatgggtccggggggaacaaccatgccctcctgcacttccagcagacgggacac
cctctagccgtcaaactgggtaccatcacccccgacggcgcagatgtgtactcctatgac
gaggatgatatggtactggatccaaagctccccgaacacctgtcccactttggcatcgac
atgatgaccatggaaaagacggagcatacgatgacagagctggagatagcggtgaaccag
cgtgtgggggagtgggaggtgatccaggagtcaggggccaccctgcggcctctgtcgggc
cccggcctcaccggcatgaagaacctgggcaacagctgctacctcaactcggtcatgcaa
gtcctcttcaccgtgcctgacttccagagcaagtacgtctcaaacattgacaagatcttc
aatgaagctccaagcgaccccacccaggacttcaaaacccaagtagcaaagctgggctat
ggtctgttgtcgggcgagtattccaaaccagcccctgacccaggagagggttctgaaccc
agctctgaacccagaggtgaccaggttggcatagcagcgcgtatgttcaaagcacttgtt
gggcggggccacccggagttctccaccaatcgacaacaagacgcccaggagttcttatta
cacttcattaatatggtggagagaaactgtcgttcgggggtgaacccatctgaagccttc
cgtttcctggtagaggagaggatcgtgtgtcagcagtcacagaaagcaaagtacacgcag
agggtggactacatcctccagctacctgtgcccatggaccaggccaccaacacagaggag
ctgcaggaagctgagcgtcggcgtgaggaggcagactcgtcgggagcccctccccccgcg
ccagtgcgcgcctgtatcccattcacagcgtgcatggcggctctcagcgaaccggagacg
ctcacagacttctggagctccgccgcgcaggccaagaccaccgccaccaagaccacccgc
tttgcctctttccctgaccacatggttatccaggttaagaagttcacttttggacaggac
tgggtccccaagaaactagacgtgagcatcgacgttcccgacacgctggacctgactgcg
ctccgtgggaccggccagcagccgggggaggagcttctgccagaggtggccccaccccct
ctcatgacccctgacgtggaggtcaaaggtatcctgggttcccacggcaatgaggaggac
gactcgctctactccccactactgtccccagtcctggatgactctaccgtgtcccagttg
tgtgaaatgggattcccactggaggcctgcaggaaggctgtgtactatactgggaatact
ggaatcgacgcagccatgaactgggtcatgggccacatggacgacccagatttctccgct
cccttggtgttgccgggcacaagctccgctcccgggaccacgcccacagagagcatttct
gaggagcacctagcaaccatcgtctccatgggcttcagccgagaccaggccacgcgagca
ctgagggccacgagtaacgtcctagagcgcgccgtggactggatcttctcccacctggat
gatctagagtccatggaggtttcggaggggggccgctcggccgccgagagcgaggggtac
agggagccccctcctgggcctaaagtccgagacggacccggcaagtatgaactgtttgcc
ttcatcagtcacatgggcacgagcactatgtgtggccactacgtctgccacatcaagaag
gaccaacagtgggttatctttaacgatcagaaagtgtgtgcctcagagaagccgcccaag
gacctgggttacctctacttctaccggagagtcaccgagtga
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