Oncorhynchus keta (chum salmon): 118368272
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Entry
118368272 CDS
T09424
Name
(RefSeq) polycomb group RING finger protein 5-B-like isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118368272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118368272
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
118368272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_5
zf-Nse
zf-RING_6
zf-rbx1
Actin_micro
TRAF3_RING
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
118368272
NCBI-ProteinID:
XP_035608142
EnsemblRapid:
ENSOKEG00005028815
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All DBs
Position
3:complement(18031218..18050459)
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AA seq
237 aa
AA seq
DB search
MTSPRKHLVKDFNHFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQV
HETNPREMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWRSRKWKENGEEDGPRSKRSRLD
DDDGGGGGGDGDYHRSDPQIAICLGCCCVDSLVGESVVKGLMKKFIRCSTRVTVGTIKKF
LSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGETAYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccgagaaagcacctggtcaaggatttcaaccactttatcacatgctacgtg
tgcaaaggatacctgatcaagcccaccacggtgacagagtgcctgcacaccttttgtaaa
agttgcatcgtccaacactttgaagacagcaacgactgccccaaatgtggcatccaagtc
catgaaaccaaccctcgagagatgttaaggttggacaacactttagaggaaataattttc
aaactcgttcctgggctaagagaaaaagaacaacagcaggagatcgagttctggaggagt
cgaaagtggaaggagaatggagaagaagacggcccccgatcgaagagatccaggctggat
gacgacgatggtggtggtggtggtggggatggagactaccacaggagtgacccgcagata
gccatctgtcttggctgctgttgcgtagacagtctggtgggagagagcgttgttaagggt
ttaatgaagaaatttatacgctgctcgactcgagtgacagtcggaacaatcaagaagttt
ctcagcttgaagttaaagcttccaagttcttatgagctagacgtcctatgcaacggggag
atcatgggaaaagaccacaccatggagttcatctacatgacgcggtggagacttcgcggt
gaaaccgcctacccaatggtactagaatatcggccacggatagactttggttga
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