Oncorhynchus keta (chum salmon): 118370052
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Entry
118370052 CDS
T09424
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118370052
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118370052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
DUF3437
Motif
Other DBs
NCBI-GeneID:
118370052
NCBI-ProteinID:
XP_035610715
EnsemblRapid:
ENSOKEG00005036237
LinkDB
All DBs
Position
37:1611557..1702276
Genome browser
AA seq
3067 aa
AA seq
DB search
MHFSKLSWRFCVLGNKCTEKAQCSATDALTRECCPDAVKVKRNMKIQKKDKQMSTTPLQK
YTPATTASNATAQNAQTPFPRGTLGSKDQIRDLGGGQTNHCMANSKHPRMGEASTSSVSP
CAPSSPLNREEDDGGGGRWAKKKKKQKKKDKWGEPGSAWQHKGLERDLKPNKKREQKEGK
ELLRNFKEPRKVKAPKEVKRGRKPKVQALPQPPSECKSAPSPPRQRGRKPREQVFQGPVP
AEKKKKGKRKSEAVVQEAGERDNVAFLSALAIRGEESIDPLDNTKRRSGRQVKRRKYNED
LDFKVVDDDGETIAVLGTGRIPALNAATLTWQAEEPPEDEANIIEKILSVRTVKKEASPE
DTTEESEEFYVKYRNFSYLHCKWATLEELEKDPRIQQKIKRFRTKHAQMKHIFVEPNEDL
FNPDYIEVDRVLEVAITTDTETGEEVTHYLVKWCSLSYEEATWELQEDVDPVKIREFEEI
KRIPEFKFVERPQPDKWQKLDKSKDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEMG
LGKTIQSITFLFEMFSMGLRGPFLIIAPLSTITNWEREFRTWTEINVIVYHGSQISRQMI
HQYEMYHKDQQGNVVLGGYKFHGVITTFEMIMADCPELKKIHWRCVVIDEAHRLKNRNCK
LLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESLFLEEFGDLKTEEQVK
KLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNMQKKYYRAILEKNFTFLAKGANQH
NMPNLINTMMELRKCCNHPYLIKGAEEKILDSFRKTHSPDAWDFQLQAMIQAAGKLVLID
KLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKVD
SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT
RNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGAQQMTKIEVEDLLRKGAYGALMDEED
EGSKFCEEDIDQILQRRTQTITIETEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKI
TELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRFSERN
RRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWQLAEHDMEVLCRALLVYCVRHYMGDD
KIKSFIWDLITPAKDGHKQDLQNHSGLSAPVPRGRKGKKLKNQLSVPEMKHADWLVNCNP
EVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGETAAQSLEGIHASKLEVALPDIDY
IEIPAGWWDAEADKSLLLGVHKHGYERYNAMRADSELCFLERVGMPDVTALSAEQSGGEV
VADLTDSACKSDDVKDDPECNQEEGGVEKVDNKDETSSSNDAMDKHDSVGQDTLSVEMVQ
ETFGQEGTELKGRPLWPAGPALTARLRRLITAYQRFMRREPLRHDFLLPEGLGAGLGTMS
WQLGEEIRRCTVAAAEPDPLFLEWQRRWVMMSEQRWTRREQADFYRTVSSFGVVYDPEKK
AFDWSPFRSFARLERKTDESLERYFSSFVSMCRTACRLPPRKDEGPLDHNLFVEPITEER
AARTLYRIELLRKVREQVLRHPLLGPRLQLCRPSLYLPVWWECGKHDRDLLIGAARHGLS
RTDYYILNDPQLSFLEAHRNYVQKENHQGYQPSVHHAGMAPSPHHHPCCICETGLGQCHS
PQPPEYGHQAIPSSSIHFHSHPNVHGHPPEIVGTGPGGSLGMVSGPREGFLVCPPLDESL
ELASLQHEGLASDSLHGKSTKEAFNGFPFNSAQGGQSMLNSYGVQGELTSEQSADMDPII
SGKLRSDVLVGSSEENGLMAPLLELEQELQVPWESTDHTGTADVVGMFNEADPILGAPDL
DTEFLDTEEQPGDGGREDGAGGVLDDCLGIPSSRSDPGEPLPSSFMLFKNIDVSEEEPAA
EHTNLSASPLPSYTTPPHLSLSHMTLHPHHHNQGDVEQPEEKLSDSDTVAHVPSPDKREA
ERDVSFEFDKEEMSVDSPSLVGLEQGLETSCIPCEDTLQEEPCYGMGMGSPVESCQVALE
RPLGLVEEGLLEGQAEEPLEISPMDSQEKDPVDGPLEDFGKDKAPEGPFTGPLEQYDVDQ
EAAFEGPAEAESTLSEHTLPTVDATYTLPPSSSVPRPQPEPPLSPRVAGVSQIKLEFPLD
PESSESKSDILEPDRTVLTPKLEQTEVLLEVKDKIKEERPQTPVSVVDSYVEVAQFAVPM
SMCEMPDSLQDAREPTIAQLLQEKALYSFSEWPKDRVIINRLDSICHAILKGKWPSSSQQ
YDSPSSLANTCVPNIVHQRAGFISARVQPSQSLNLNIPAPPVTRLPKYKSRDAGECSQGG
WRLTSLPLLQERLVAPPYLPELKRGRRAFEYKAEVLSKQCHTGENIPVTVSNSGGALLLN
GWQEAAMDLSKAGDLGIGGDAAATVGHMSHQVHPVARKLPAMSAMQGSVGKDMAGILQAG
LIHHVTGQIVNGNLRCDDAIMRRRRGRRRNVEAVDIGFVKSRGMHVQEKQGRVEVTSHSA
VSSTSSPPERPPGTSTPTLSEVVAIDREAANNGLMEWLRQNPNCSMEVPTFAPSPGSAIL
HSFVERPKQRRHRCKDPTKLDVNSLTGEERVPVVHRSTGRRLGGAMAPAIKELSRWLDAN
TEYCVAPDWADVVKHSGFLPEGKFTRILTEPVCRDQGPRRRGRRPRSEMPKPLLSESPMG
PLCMNGGLIGSMDLVSLQNLRNVQGIPLTGLMGFPHGFAVSAGEDSKNGLSMLPMMLHGI
HGAPHMFSVQGLMGLPPTCSASTSSSTAAVTTTAASSSAASSPSRGPGQASSSTGAEGSG
IQSGTERKREEKQQGAMGSHSIAAITTTTATSSGSHQAFNPFLIPGMSHGLLYPHMFLPH
GGVMALPGMPPADSSSSPKTKKKRTREEGVVVVVVEAGSHSHLQTDSGPPKKHSDGQTGE
RTADQAGPEDREQTEDSIQEEGTGHDSHDPPEVNPKKNVEEERGTMEISLMEEEKLPEEE
SVSRGAE
NT seq
9204 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttctaaactgtcatggcgtttttgtgtccttggaaataaatgcacggagaaa
gcccagtgttcggcaactgatgctctgacccgtgagtgttgcccagatgcagtgaaggtg
aagagaaatatgaaaatacaaaagaaggacaaacagatgtccaccacccccttacaaaag
tacactccagctacaaccgcctctaatgcaactgcccaaaatgcacaaactccatttccc
aggggtaccttgggctctaaggaccagatcagggaccttggtggtggtcagaccaatcac
tgcatggccaactccaagcaccccaggatgggcgaggcgagcactagctcggtcagcccc
tgcgccccctcgtcacccctcaacagagaggaggacgatggagggggcgggcggtgggcg
aagaagaagaagaaacaaaagaaaaaagacaagtggggcgagcctggcagtgcctggcag
cacaagggcttggagagagacttgaaaccaaataaaaagagggagcagaaagaagggaag
gagctgctgcgcaatttcaaggagcccaggaaggtgaaggcaccaaaagaggtgaagaga
ggaagaaaacccaaggtgcaggccctgccccaacctccttcagaatgcaagagcgccccc
tctcctcccagacagaggggccgcaaacccagagagcaagtcttccaagggccggtccca
gcggagaagaagaaaaagggcaagcggaaaagcgaggcagttgtccaggaggctggggag
agagataatgtggccttcctgtccgcgctggccatcaggggagaggagagcatcgatccc
ctcgacaacacgaagcgtcgctcggggcgacaggtgaagcgcaggaagtacaatgaggac
ctggacttcaaggtggtggatgacgacggggagactattgccgtgctggggacgggccgt
atccctgccctcaacgctgccactctcacttggcaggctgaggagccccctgaagatgag
gcaaacattattgagaaaatcctgtcggttcgaactgtgaagaaagaggcgtcccctgag
gatacaactgaggagtcggaggagttctatgtcaagtacagaaatttctcctacctgcat
tgtaaatgggcaacattggaggagttggagaaggaccctcgcatccagcaaaaaattaag
cgcttcaggactaagcatgcccaaatgaagcacatatttgttgagccgaatgaagacctc
tttaaccctgactacatagaagtggatagagttttggaggtggccatcactacagacaca
gagacaggagaggaggtgacacactacctggtgaagtggtgctccctgtcctatgaggag
gctacatgggagcttcaggaagatgtggacccggtgaagattcgggagtttgaggagatc
aagagaatccctgaattcaaatttgtggaaagacctcagccagacaagtggcagaagctg
gacaaatccaaagactatcgaaacgggaaccagctgagagagtaccagctggagggaatg
aactggctgctcttcaactggtacaacaggaagaactgcatcctggctgacgagatgggc
cttgggaagaccatccagtccatcaccttcctctttgagatgttctccatgggcctgcgg
ggacccttcctcatcatcgcccccctttccaccatcaccaactgggagagggagttccgc
acctggactgagatcaacgtcattgtctaccacggcagccagatcagccgccagatgatc
caccagtatgagatgtaccacaaggaccagcagggaaatgtagtgttgggcgggtacaag
ttccacggagtgatcaccacctttgagatgatcatggccgactgtccggagctgaagaag
atccactggcgctgcgtggtcatcgatgaggctcaccgcctcaagaaccgcaactgtaaa
ctcctggagggcctcaagctcatgaacctggaacacaaggtcctcctgacaggcaccccc
ctacagaactcagtggaggagctctttagtctgctcaacttcctggagcccctacagttc
ccctcagagagcctcttcttggaggagtttggagatctgaagactgaggaacaggtgaag
aagcttcaggccatcctaaagcccatgatgctgcggcggctgaaggatgacgtggagaag
aacctggcgcccaaggaggagaccatcatcgaggtggagctcaccaacatgcagaagaag
tactaccgggccatcctggaaaagaacttcaccttcctggccaagggggccaaccagcac
aacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgcaaccacccctac
ctgatcaaaggtgcggaggagaagatcctggatagcttcaggaaaacgcacagccctgat
gcttgggacttccagctccaggccatgattcaggcagcggggaagctggtgcttattgat
aagctgctgccaaagctgattgctggcggccacaaggtgctggtcttctcccagatggtg
cgctgcctggacatcctggaggactacctcatccagaggaggtacacctatgagcgcatc
gacggcagagtgcggggtaacctgcgccaggcagcgatcgacagattctgtaaggtggac
tcggaccgctttgtgttcctgctgtgtacccgtgctggaggcctgggcatcaacctgacc
gctgcagacacctgcatcatcttcgactcggactggaacccccagaacgacctacaggcc
caagctcgctgccaccgcatcggccagagtaaagcagtgaaagtgtacaggctgatcacc
agaaactcctatgagagggagatgtttgataaagccagtctgaagctgggtctagacaag
gctgtgctgcaggacattaatcgaaagggcagcctcaatggggcgcagcagatgaccaag
attgaggtggaggacctgctgaggaagggggcgtatggcgcactgatggatgaggaggac
gagggctccaagttttgtgaggaggacatcgaccagatcttgcagcgccgcacccaaact
atcaccatcgagacagagggcaagggctccaccttcgccaaggccagctttgtgtcttct
ggaaacagaactgacatttccctggacgatcccaacttctggcagaaatgggccaaaata
accgagctggagattgactccaaagcagagaaggagagcctggtgattgatacacctcgt
gtgaggaagcagactcgtcactacaactcgttcgaagacgacgagctgatggagttctct
gagctggacagcgactcagaagagaggccctgtcgcacccgccgcttcagcgagaggaac
agacgctacctccgcgccgaatgcttccgcgtcgagaagaacctgctcatattcggctgg
ggtcgctggaaggacatcctaacccacgggcgcttcaagtggcaactggctgagcatgac
atggaggtgctttgccgggcactgctggtctactgtgtgcgtcactacatgggcgatgac
aagatcaagagctttatctgggacctcatcacacctgctaaggatggccataaacaagac
ctgcagaaccattctggcctgtccgccccagtgcccaggggacgcaagggtaagaagcta
aagaaccagctgagcgtgcccgagatgaagcatgcagactggcttgtcaactgcaaccca
gaggtagtgctacaggacgacagctacaagaaacacctcaagcagcactgcaacaaggta
cttctgagggtgaggatgctgtactacctcaaggcggaggtcctgggagaaactgctgct
cagtccctggagggcatccatgccagtaaactggaggtggcactccctgatattgactac
atcgagatcccagcaggctggtgggatgcagaggcggataagtctctcctcttaggagtg
cacaaacacgggtatgagcgatacaatgccatgcgggccgactcagagctatgcttcttg
gagcgggtgggcatgcctgacgtcacggcgctctcagccgagcagagtggaggagaggtg
gtggctgacctcactgacagtgcttgcaaaagtgatgatgtgaaagatgatcctgaatgc
aatcaggaggagggaggagtggaaaaggttgataataaggatgaaaccagctccagtaat
gatgcaatggacaagcatgacagtgttggtcaagacacactctcagtggagatggtccag
gagacctttggccaggagggcacggagctaaagggtcgccctctgtggccggccggccct
gcccttacggccaggctacgtcgcctcatcacggcctaccagcgcttcatgcggcgcgag
ccgctgcgccacgacttcctgctacctgaagggctgggggcaggcctggggacgatgtcc
tggcagctgggggaggagattaggcgttgcacggtggccgccgccgaacctgaccctctc
ttcctggagtggcagagaaggtgggtgatgatgtctgagcaaaggtggacacggcgtgag
caagcagatttctaccgcaccgtgtcgtcgttcggtgtggtgtacgacccggagaagaaa
gcatttgactggagtcctttccgctcctttgcccggttggagaggaagaccgacgagagc
ctggagagatacttcagtagctttgtgtccatgtgccgcaccgcctgcagattgcccccc
aggaaggacgaagggcctctggaccacaacctgtttgtggagcccatcacagaggagcga
gcagcacgtaccctctaccgcatcgagctgctgcgcaaggtcagggagcaggtgctgcgc
catccactgctgggcccgcggctgcagctgtgtcggcccagcctctacctgcctgtgtgg
tgggagtgtggcaagcacgaccgcgacctcctgattggagcggcccgccacggcctcagc
cgcactgactactacatccttaacgacccgcagctatctttcctggaggcccaccgcaac
tacgtccagaaggagaatcaccagggctaccaacccagtgtgcaccacgcaggcatggcc
ccctcaccgcaccaccacccctgctgcatctgtgagacaggcctcggccaatgccactct
ccccagccgccggagtacggtcaccaagccatcccctcctcttcgatccacttccattct
cacccgaacgtccacggtcacccgccagagatagtgggcacgggccccggtggcagccta
ggtatggtgtctgggccaagggagggcttcctggtttgcccccctctggatgagtcattg
gaactggcatcactgcagcatgagggcctggcctcagattccctccatggtaagtctacc
aaggaggccttcaatgggttccccttcaactcagcgcagggcggccagagcatgctcaac
tcgtatggtgtgcagggggagctgaccagcgagcagtcggccgacatggacccgatcatc
tcaggcaagctgcgcagcgacgtgctggtgggctcctcggaagagaatggccttatggcc
cccttgctggagctggaacaggagctgcaggtgccctgggagagcactgaccacacaggc
acagcagatgtcgtgggcatgttcaacgaggccgaccccatcctgggggcaccagacctt
gatacagagttcctggacacagaggagcagccaggagacgggggaagggaggacggagca
gggggagtgcttgacgactgcctaggtataccctcatcccggagcgacccaggggagccg
ctgccctccagtttcatgctgttcaagaacattgacgtgagcgaggaggagcctgctgca
gagcacacaaacctctccgccagcccccttccttcctacaccacccctccgcacctgtcg
ctgtcccatatgaccttgcacccccaccaccacaaccagggtgatgtcgagcagccagag
gagaagttgagtgactctgacactgtcgcccacgtgcccagccccgacaagagggaggca
gagagggatgtgtcctttgagtttgacaaagaggagatgtctgtggacagtcctagtctg
gtggggctggagcagggcctggagacctcatgtataccatgcgaggacactctccaagag
gagccctgctatgggatgggaatgggctctccagtggagtcatgtcaggtggctctagag
aggcccttagggctagtggaggaggggcttctagagggacaggctgaagaacccttggag
atatcgcccatggattcccaggagaaggacccagtggatggtcctctggaagacttcggt
aaagacaaagcaccagaaggaccattcacagggccgttggagcagtacgacgtagatcaa
gaagcggccttcgaggggccggccgaagcagagagcactttaagcgaacacacactcccc
actgttgatgctacatatactctgcccccatcctcctcagtccccaggccccagcctgag
ccaccactgtccccacgtgtggctggagtgtcacagatcaaacttgagttccctctggac
ccagagagctctgagagcaagtcagacatactggagcctgacaggactgtcctcacgccc
aaactggagcagacagaggtgctgctggaggtaaaggacaagatcaaggaggagaggccc
caaactccagtctctgtagtggacagctatgtggaggtggcacagtttgccgtccccatg
tccatgtgtgagatgcctgacagtctgcaggacgcgcgggagcccaccatcgcccagctg
ctgcaggaaaaagccctctactccttctccgagtggccaaaggatcgggtgatcatcaac
cgcctggacagcatctgtcacgccatcttgaaggggaagtggccctcctccagccagcag
tatgactcccctagctctctggcaaacacctgtgtgcctaacattgtgcaccagagggct
ggcttcatttcagccagggtacaaccatcccagagccttaacctcaacatcccagcccct
cctgtaacccgccttcccaagtacaagtcaagagatgccggagaatgcagccagggaggc
tggaggttgacatccttgcctctcttgcaggagaggctggtggcgccgccctatttgcct
gaactaaagcggggtaggcgtgcgtttgaatacaaggcagaggtgctcagtaagcagtgc
cacacaggggagaatatacctgtaaccgtgtcgaacagtggtggggcgctgctgctcaac
ggctggcaggaggcggccatggacctctccaaggccggggatctgggcattgggggcgac
gcggcagccactgtaggccacatgagtcaccaggtccaccccgttgcccgaaaactgccc
gccatgagcgccatgcagggttcagtggggaaggacatggccgggatcctgcaggcaggt
ctcatccaccacgtcaccggccaaattgtcaatggcaacctgaggtgtgacgacgcaatc
atgcgccggaggagaggcagacggagaaacgtggaggcggttgacatcgggtttgtcaag
agcagaggaatgcatgtgcaggaaaaacagggcagggtagaagtcaccagccattctgca
gtgtcgtctacctcctccccacctgagcgccccccgggaacctccacccccaccctgtca
gaggtggtggccatcgacagagaggctgccaacaatggcttgatggaatggctgcgacag
aatcccaactgtagcatggaggtgcccactttcgcaccgtctcctggctcagcgattctg
cacagctttgtggagcggcccaagcagaggcggcatcgctgtaaagaccccaccaagttg
gatgtcaactccctaacaggggaggagagggtgccagtggtccacaggagcactggccgc
aggcttgggggtgctatggctccagcaatcaaggagctttcacgatggctggatgcaaat
actgagtactgcgtggcacctgactgggcagatgtagtgaaacactctggttttcttcct
gagggcaagttcacccgcatcctcactgagcccgtgtgccgcgaccaggggccccgccgc
cggggccgtcgtccccgcagcgagatgcccaagcccctcctctccgagtctcccatgggc
ccgctctgtatgaacggcggcctgatcggcagcatggacctggtcagcctccagaacctc
cgcaatgtccagggcatcccactcacaggcttgatgggattcccccatggctttgctgtg
tccgccggtgaagactcaaagaatggtctgagcatgctgcctatgatgctccacggcata
catggcgccccccacatgttcagcgttcaggggctgatgggtttgccgcccacctgctcc
gcttccacctcctcctccacggctgcagttaccaccactgcggcctcctcctcagcggcc
agtagcccctctcgaggccccggccaggcatcttcgagcacaggggccgagggctccggc
attcagtctggcacagagagaaagagggaggaaaagcagcaaggcgcgatgggcagccac
agcattgcggccatcaccaccaccacagcgaccagcagtggcagccaccaggccttcaac
cctttcctcatcccggggatgtcccatggactgctgtaccctcacatgttcctcccgcac
gggggcgtcatggcgctgccaggcatgccgcctgcagactcctccagcagcccaaagacg
aagaagaaaagaacaagggaggaaggggtggtggtggtggtggtggaggcaggcagccac
agccacttacagacggacagtgggcctccgaaaaaacacagtgatggccagactggggag
agaacggctgaccaggctgggccagaggacagggagcagacggaggacagcattcaggag
gagggcacgggacacgactcccatgatcctccagaggtaaaccccaagaagaacgttgaa
gaggagagaggaacgatggagattagcttgatggaggaggaaaaactgcctgaggaggag
agcgtgtcaaggggggcagagtag
DBGET
integrated database retrieval system
