Oncorhynchus keta (chum salmon): 118373433
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Entry
118373433 CDS
T09424
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04310
Wnt signaling pathway
oke04520
Adherens junction
oke04916
Melanogenesis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118373433 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118373433 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
118373433 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118373433 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118373433 (lef1)
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
118373433 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
118373433
NCBI-ProteinID:
XP_052320803
EnsemblRapid:
ENSOKEG00005020278
LinkDB
All DBs
Position
16:16968623..17026910
Genome browser
AA seq
400 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDQEQIFAELSHSEEDEGDLADIKSSLVNESET
SPNSNHDGTRQSQISQDSYHEKHRDHHDDGKHLDMYNKGHQYSGYPGYIMMTNMNNDSYM
NNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDVNPKQGQYH
SSCLSTGMQRHHPGPDMTNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIV
NPQVKHEPQHDNDLMHIFARKPQHQDQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAEC
TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRE
KIQEPAADPHRTPFDPSALTRVGFQNHHAGTGQRMKTAYI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactagcaggtggtggtggtggcggggaccctgagctttgtgccaccgacgaa
atgattccgttcaaggatgagggagaccaagaacaaatattcgcagaactcagtcactca
gaggaagacgagggagacttggcagatatcaagtcatctttagtaaatgagtcagagacg
agtccaaacagcaatcatgatggaactagacaatcccaaatatcccaagactcatatcat
gaaaaacacagagaccatcacgacgatgggaaacacctagacatgtacaacaaaggtcac
caatactctggatacccaggttacatcatgatgactaatatgaacaacgactcctacatg
aacaacggctccctgtcgccgcccatgcccagaacgtccaataaggttccggtggtgcag
ccatcgcatgcggtccatccgctcacccccctcatcacgtacagcgacgaacatttcgcc
cccggaccccactccggacaccacccccaggacgtcaaccccaaacaaggacagtaccac
tcatcctgtctctctacaggcatgcagcggcatcaccccgggccggacatgaccaacttc
taccccctctcccctggaggagtgggacagatcacgcccccactgggatggttctcccac
cacatggtcccgggtccccccggcccccacgccacagggatcccccacccggccatcgtc
aacccccaggtcaaacacgagccccagcacgacaacgacctgatgcacatttttgccagg
aagcctcagcaccaggatcagaggaaagagcaggagcccaagagaccccacatcaagaag
ccgctgaatgccttcatgctgtacatgaaggagatgagggccaacgtggtggcagagtgc
acactcaaggagagcgccgccatcaaccagatcctgggacggaggtggcatgctttatcc
agagaagagcaagctaagtattacgaattagcccgcaaggaacggcagctccacatgcag
ctctacccaggctggtccgccagagataattatggaaagaagaagaagcggaagagggag
aagatacaggaaccggctgcagacccccatagaactccattcgacccctccgccctcact
agagtgggctttcagaaccaccatgcaggtacaggccagagaatgaaaacggcgtacatc
tga
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