Oncorhynchus keta (chum salmon): 118373508
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Entry
118373508 CDS
T09424
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118373508
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118373508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Fib_alpha
Y1_Tnp
LMBR1
MAP65_ASE1
Gp58
Exonuc_VII_L
Tli4_N
DUF4239
DUF4455
Motif
Other DBs
NCBI-GeneID:
118373508
NCBI-ProteinID:
XP_052361667
LinkDB
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Position
4:31026529..31031765
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AA seq
502 aa
AA seq
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MAQQAVLLDQDQFSSSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDDLKGIYSCPQCRQT
FTPRPALRKNNMLAEVVEKLKKTGLQAAPPDLCYAGPGDVACDFCTGTRKQKALMSCLVC
LVSSCKTHLQPHYSVPALKKHKLVKASTQLQENICSCHDELLKIYCRTDQNCICYLCMVD
DHKGHDTVSAAAERTEKQSQLGMSQQKLQQRIQEREKELKELQQAVESLKHSAQAAVEDS
DRIFTELIHSIERRCSEVKELIRDQEKAQVSQADGLLEQLEQEIAELRRRNAELEQLSHT
EDHIHFLQSYQSLSSPSVSSDLPGIVIHPLQYFGDVNKAVSDVREKLEDFLKGEWTKIST
IVNSVDVLLPPEPKTRECFLQRLLQVPSSSHWTQIQHRNPSLCLSKTERERREPAERRGE
VGTSREEGTSREERRGEVGTSREERRGGNQQRGGIQQRGEEGTSREKIMYFLEGKGRRRG
QTTYWDRQSQIRTTNRRDFFTD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaggcagttctgctggaccaggaccagttctctagttctgtctgtctggat
ctactgaaggagcccgtagctattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaggggatctacagctgtcctcagtgcagacagacc
ttcactccaaggcctgctctgagaaagaataacatgttggctgaagtggtggagaaactg
aagaagacaggacttcaggctgctccccctgatctgtgctatgctggacctggagatgtg
gcatgtgatttctgcactgggactagaaagcagaaagccctcatgtcctgtctggtgtgt
ctggtgtcttcctgcaagactcacctacagcctcactatagtgtccctgcactaaagaag
cacaagctggtcaaagcttccacacagctacaggagaacatctgctcctgtcatgacgaa
ctgctgaagatttactgtcgtaccgatcagaattgtatctgttatctgtgtatggtggat
gatcataaaggccatgatacagtgtcagctgcagcggagaggactgagaaacagagtcag
ctggggatgagtcagcagaagctccagcagagaatccaggagagagagaaggagctgaag
gagctccaacaggctgtggagtctctcaagcactctgcacaggcagcagtggaggacagt
gataggatctttactgagctgatccactccattgagagaaggtgctctgaggtgaaggag
ctgatcagagaccaggagaaggctcaagtgagtcaagctgatggactcctggagcaactg
gagcaggagatagctgagctgaggaggagaaacgctgagctggagcagctctcacacaca
gaggatcacatccatttcctccagagttatcagtctctctccagtcccagtgtctcttca
gacttacccggcatcgttatccatcctcttcagtactttggagatgtgaataaggctgtt
tctgatgtcagagagaaactggaagacttccttaaaggagaatggaccaagatctccacc
atagtgaattcagtggatgttttactgcctccagagcccaagactagagaatgtttctta
caacgcctcttacaagttccttccagctcacactggacccaaatacagcacagaaatccc
tctctctgtctgagtaaaacagaaagagagaggagggaaccagcagagaggagaggtgag
gtgggaaccagcagagaggagggaaccagcagagaggagagaagaggtgaggtgggaacc
agcagagaggagaggagaggagggaaccagcagagaggcgggatccagcagagaggagag
gagggaaccagcagagagaagataatgtactttttggaagggaaggggagaagaagggga
caaactacctattgggaccggcaatcacagatccggaccaccaaccgaagggactttttc
acagactaa
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