Oncorhynchus keta (chum salmon): 118374006
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Entry
118374006 CDS
T09424
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118374006
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Others
Others
118374006
Endosome - Golgi transport
118374006
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118374006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Neurobeachin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
118374006
NCBI-ProteinID:
XP_052341195
EnsemblRapid:
ENSOKEG00005026360
LinkDB
All DBs
Position
29:51304413..51522127
Genome browser
AA seq
2013 aa
AA seq
DB search
MASEETPGAGRPDGQGDGAAAVSLNPGIPIRGIKMKFAVLAGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEKDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTDT
ALINLVLDRLAHTDSMIADLMVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKLL
SVLRSMTHRNGPDSFFSFPGKSAAAIALPPIAKWPYQSGFTFHTWLRMDPINNINVDKDK
PYLYCFRTNKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTIVHVYNRW
KNSEISCFVNGELASYGEITWFVNTSDTFDKCFLGSSETADADRVFCGQMGAVYLFGEAL
SAAQILAIYQLGPGYKGTFKYKAESDLLFAEHHKTLLYDGKLSSCISFSYNPRATDAQLC
LESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSD
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRSVLDIVLAF
ARYLSNLQNGVLLLKQLCDHILFNPAIWIHAPAKVQLVLYTYLSTEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPQDRSGVTPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDYG
VKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASN
SEGIRVQALKVLGYFLKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFN
NSKDNRRSLLQCSVWQDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLARMFRQYQRLGSEGDAAGIRTISGASRDSEILGQLRTNR
DQGEETAPSTVIELTIDPEGVSQNQESPNTTPHSETSTASASTPSPPEREGDRSQRGQAP
ITVSNMLARAEEEEELQQVQNQISEDQRGGAGDRAEVTTQETEAKLTGDKVSSKTVESMA
ETETATDKTDEAAAASTAETDEATKPEIEDAKVAKSETSDDATTSDTDKVVSPQTDGEKG
SETHSCKASHVLMSEDSLNEPKEPEMAKQPEEQVSAAISACQQGSAVGASVQSVSDQVRP
SSTDDSMEESSFVSAAGGEDQEKEEEEVKTEEVVVEEEKMEEVKAEEIKTEVKTEKEKEE
ESVAEVKKSAVESQATPPASVPEESRTQPPKMEEIDLDPSAPGTDPTSTEPAWQPLESTT
PPPSALEAILPAAVGATVSKSDTPQAVAPAEVPSTKGFQPEAPQATEAPSSRTDTSLKVA
TATAVEAGKDSAAEGPGSATKTKEIHIARLDVSSVASDTERLALKETSTPEVPQGDAAGA
SGGQANESSSSARSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDFVNS
SENVVFVHNTVHLISQVVDNLIMSCGGILPLLSAATSSSHDLENIEPSQGLSVEASVTFL
QRLINLVDVLIFASSLNFSEIEAEKNMSSGGILRQSLRLVCAMAVRNCLECQQQSHFKPS
QDSARGQQAVHSLMGTAKSMPAQSPVDVVTGGMSPIRDMDRLLQEMDINRLRAVVFRDIE
DSKQAQFLALAVVYFISVLMVSKYRDILEPQNDKKLPQRSQSARSADSNAVSGGPDLESS
VSLRRRDSGIGDDHSSVAPSEADTTAQGPDAVSEALSTLSSEVRGHRDNPTADARGGKNV
KDILRSLVSAPADDIMVDPSLLPPAFLGAAMGNNPNQFRSFDRSVRVAPKKVGGAPSPGS
STPVPSATASVAATGTPVNNVAVVSTGDASQSTTAEAAAGSASANLPSVPTLSPMTRDTA
PSMSISERLEHALDKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLMCMKSSSSVV
ELVMLLCSQFIQCRADRGFMNPDEGIIAGVVQQ
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacgcctggtgctgggcgaccagacgggcaaggtgatggagctgcg
gcggtgtcgctcaaccctgggatcccaatccgaggaatcaaaatgaaattcgctgtcctc
gccggcctggtggaagttggggaagtttccaaccgggacattgtggagaccgtcttcaac
ctgttggtggggggccagtttgacctggagatgaacttcattatccaggagaaggacagc
attgtgtgcatggtggagctgctggacaagtgtgagcccacgtgccaggcggaggtgtgg
agcatcttcacggctatcctgaagaagagcgtgaggaacctgcaggcctgcaccgacacg
gccctcatcaacctggtcctggaccgcttggcccacactgacagcatgatcgcagacctg
atggtggacatgctaggggtgctggccagctacagcatcacagtcaaggagctgaagttg
ttcttcagcaaactgcaaggagagaaaggccaatggcctccccatgcggtgaagctgctg
tctgtcctgaggagcatgacccaccggaacggacctgactccttcttcagcttcccaggg
aagagtgctgctgctatagctctgccccctatagccaaatggccgtaccagagtggattc
accttccacacgtggctccgcatggatccaatcaacaacatcaatgttgacaaggacaag
ccttacctgtactgttttcgcaccaacaaaggtctgggatactctgcacactttgtgggc
ggctgtttgattgtgacctcgttaaagtccaaggggaagggattccagcactgtgtgaaa
tatgacttcaaaccacagaagtggtacatggtgaccatcgttcacgtctacaaccgctgg
aagaacagtgagatcagctgcttcgtcaatggagagctcgcctcctacggagaaatcacc
tggttcgtcaacaccagcgacacgttcgacaagtgtttcctgggttcgtcagagacggcg
gacgccgaccgtgtgttctgtggtcagatgggggcggtgtatctgtttggcgaggccctc
agtgcagcccagatcctggccatctaccagctggggcctggttacaagggcacgttcaaa
tacaaggctgagagtgacctcctgtttgctgagcaccacaagaccctactgtacgacggc
aagctgtcctcctgcatttccttctcctacaacccccgcgccaccgacgctcagctgtgc
ctggagtcctcccccaaggacaacgcctccatcttcgtccactcgccacacgcactcatg
ctgcaggatgtgaaggctgtggtgacccactcggtccagagtgccatccactccatcggg
ggagtgcaggtcctcttccccctgtttgcacagctggatcacctccagcacaccagcgat
gaactggacacctctgtctgttgcactttgctgtcctttgtgatggagctgttgaagaac
tctgtggctatgcaagagcaggtcctggcttgcaagggcttcctggtcatcggttacacc
ctggagaagtcttccaaggtgcatgtgactcggtccgtcctggacattgtgctggccttc
gcccgttacctcagcaacctgcagaacggcgtcctgctgctcaagcagctgtgtgaccac
atcctgttcaaccctgccatctggatccatgcccctgccaaggtgcagttggtgttgtac
acttacctgtccaccgagttcatcagcacggtgaccatctacaacgccatccgcagggtg
ggcacggtgctgcaggtcatgcacacgctcaagtactactactgggtcgtcaacccccag
gaccgcagcggagtcacgcccaagggcctcgacggtccgagacccaatcagaaggagatc
cactctctcagagcctttctgctgctgtttgtgaaacaactcataatgaaggattacgga
gtgaaggaagatgagcttcagagtattctcaactacctgctcaccatgcatgaggacgac
aatctaatggatgtgcttcagctgctggtggctctgatgtcggagcatcacggctccatg
gtgcaggcctttgatcagcgcaacggagtacgggccatttacaagctgctggcttccaac
agtgaaggaatcagagttcaggcactcaaagtcttgggctacttcctcaaacacttgccc
gctaagaggaagtcagaggtcatgctgggtcacgggctcttctccctgctcaacgagcga
ctgatgctccactccaaccagttcagcatgacaacctacaacgtgctcttcgagatcctg
accgagcagatctgcactcaagtgatccataaacagcatccggaccccgactccaatgtg
aagattgtcaacccgcaggtcctgaaggtgatcgctgccctgctgaagaactctcccctc
tccccagagagcatggaggtgcgcagggtcttcctgtcagacatgatcaaactgttcaat
aacagcaaagataacaggaggagcctgctgcagtgctcggtgtggcaggattggatgctc
tctctgtgcttcatcaaccccaagagcagtgaggagcaaaaggtcactgagatggtgtac
gccatcttccgcatcctgctctatcacgccatcaagtacgagtggggcggctggcgcgtg
tgggtggacaccctgtccatcacccactccaaggtgacctttgagcagcacaaggagaac
ctggcccgtatgttccgtcagtaccagagactgggctccgagggcgatgcggctggtatc
cggaccatttccggggccagccgagactctgagattctgggccagctccggaccaacagg
gatcagggggaggagactgccccctccaccgtgatcgagctcaccattgacccagagggg
gtgtcccagaaccaggagtcccccaacactacccctcactcagaaacctcaacagcatct
gcctccacccccagccctccagagagagaaggagatagaagtcagaggggtcaagcaccc
ataactgtgtccaacatgctggccagagctgaagaagaggaggaactacagcaggtccag
aatcagatctctgaggatcagagaggtggtgctggtgacagagccgaagttactacacag
gagactgaagctaaactcactggggataaagtcagcagtaagaccgttgagtccatggct
gagactgagacagccacagacaagactgatgaagctgcagcagcaagcacagctgaaaca
gacgaagcgaccaagccagaaattgaagacgcgaaggtggctaaatcagaaacaagcgac
gatgctacaacatctgataccgataaagtagtaagccctcaaacggatggagagaagggg
tcagaaacgcacagctgcaaagcctcccacgttcttatgtctgaagattccctgaacgaa
cccaaggaaccggaaatggcaaagcaaccggaggaacaggtctctgctgccatctcggcc
tgccagcaggggtcagcggtcggggcatctgtccagtcagtcagtgaccaggtccgaccc
agctccaccgacgacagcatggaggaatcctcttttgtctccgccgctggtggagaggac
caagaaaaggaggaagaggaggtgaagacagaggaggttgttgttgaggaggagaagatg
gaagaggttaaagcagaggagatcaagacagaggttaaaactgaaaaggagaaggaagag
gagagtgttgccgaggtcaaaaagtcagcagtggaaagtcaagcgacaccacctgcttct
gtacctgaggagagtcggacacaaccccctaaaatggaggagattgaccttgacccgtct
gcaccaggcaccgaccccaccagcacagagccagcatggcagcctttagagtccacaaca
ccacccccttcagccctggaggccatactaccagcagcagtaggggccactgtctctaaa
tctgacaccccacaggctgtggcaccagcagaggtccccagcaccaaggggttccagcca
gaagcgccacaggccacagaggcccccagctccaggactgatacctctctgaaggtagcc
actgctactgctgtggaggcagggaaagacagtgctgcagagggccctggctctgccact
aagaccaaagagatccacattgccaggctggatgtgtccagtgtggcctcagacacagag
agactggcgctaaaggagacctccacacctgaagttcctcagggtgacgcagccggtgcc
tcaggaggccaggccaacgagagcagctcctccgctcgctccaccatgttccgtattcca
gagttccgttggtctcacatgcaccagcgcctgctcacagacctgctcttctccatcgag
actgacgtgcagatgtggaggagtcactccactaagacggtgatggactttgtgaacagc
agtgagaatgtggtgtttgtccacaacacagtgcacctcatctctcaggtggtggacaac
ctcatcatgtcctgtggaggcatcctgcccctgctttctgctgccacatcctcctcacat
gatctggagaacattgagccgtcccagggtctgtcggtggaggcctcggtcaccttcctg
cagcgcctcatcaacctggtggatgttctgatcttcgcctcctccctcaacttctccgag
atcgaggctgagaagaacatgtcctctggcggtatcctcagacagagcctccgtctggtg
tgtgccatggctgtgaggaactgtctggaatgtcagcagcagtctcacttcaagcccagc
caggacagcgcccgcggccagcaagccgtgcacagcctcatgggaactgccaagtccatg
cccgcgcagagccctgttgatgttgtgacaggagggatgtctcccatcagagacatggac
cgtctgctacaggaaatggacatcaaccgcctcagagccgtggtcttcagagatatcgag
gacagtaagcaggctcagttcttggccctggctgtggtttacttcatctctgttctcatg
gtgtccaagtaccgagacatcctggagccccaaaacgacaagaaactcccccagcgcagc
cagtctgccaggagcgcagacagtaatgccgtctctggcggtcccgacctggagagcagt
gtgtccctccgtcgccgagactctggcatcggggatgaccatagctcagtggcccctagc
gaggcggacaccaccgcccagggccccgacgccgtgtccgaggccctgtccaccctctcc
tcagaggtcaggggtcacagagacaaccccacggcggacgccaggggcgggaagaacgtg
aaggacatcctgcgcagcctggtctcggcgcctgctgatgacatcatggtggaccccagt
cttctgccgccggccttcctgggagctgcaatgggaaacaaccccaaccagttcagatcc
tttgacagaagcgttcgggtggcgcccaagaaggtgggcggggctccgtccccaggctcc
tccactcctgtcccatcagccaccgcttccgtggcggctaccgggacaccagtcaacaac
gttgccgtggtttccacgggcgatgcctcccagagcaccaccgctgaggctgcagccgga
tcagccagcgccaacctgccatctgtccccacgctgtccccaatgacccgggacacagcc
cccagtatgagtatctcagagagactggagcatgctctggataaggctgcccccctactg
agagagatctttgtggactttgcccccttcctctctcgcaccctgctgggtagtcacgga
caggagctcctcatcgagggcaccagtctgatgtgtatgaagtccagcagttcggtggta
gagctggtcatgctgctctgttctcagtttattcagtgccgtgctgatcgaggattcatg
aatccagatgaaggaatcatagcaggtgtggtgcagcagtag
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