Oncorhynchus keta (chum salmon): 118374204
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Entry
118374204 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP130-like
KO
K19192
histone deacetylase complex subunit SAP130
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118374204
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118374204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
FHBP_N
Motif
Other DBs
NCBI-GeneID:
118374204
NCBI-ProteinID:
XP_052323370
EnsemblRapid:
ENSOKEG00005037664
LinkDB
All DBs
Position
1:95329356..95384972
Genome browser
AA seq
1124 aa
AA seq
DB search
MSSQPFPTAGMPAQSNPGEKPVSINQSSKQPAGPGEDSSGDVDHHGPEDHPASSRGGEEA
LSFREDKQEPGVVRPYPQVPVQTHSLQSPVPALSQQVPNKAGTPGQPVTVFNPPVQLLQA
QTAALVDGQMKAALKSLLPSRLIAPAPASSQGQGGHIPLPLPPKVQPALLGHITVTLESH
IAPTSSIPVATISGQQGHSSNRHHLVPANIQIIRSPSVPQHTFTSHLPRGAVAAAVMSSC
KGPAVLRPASGANAGPVQHTAHHVNHQSNQSRSPVTSSTAVVPISATRNQSPVINPMFTQ
SAEVLHGHPGLTIHPPPATISIQRPQGARDTATRITLPSHPAIGGQKPQPPTHTMTQKSI
FCSGTPVAAATVAPILTTTTTTGPGTTTTGTAPHTQMTSSTIVTMTMPTHSSHATALTTS
TIPVAKVVPQPIAHTSPRVQSDYLGERTNLIQPIAHTSPHVQSDYQPIAHTSPRVQSDYP
VERTNLISISGNRSSPNPVTIEARSDRPPVPVHFQYFLPTFSSSPYPRTHTYTPITSSMS
TIRQYPVTPQTPSSALPSQPAVAVATAVRLNPMQLMAVDRIGRQSAQISTQGIQPQPIGA
QGIQPAPMGVQGLHSSGPVGTQGIQQAPIAGQQPEAKPSGMVLADGSTFVAAPMGSPFGA
AQPVATMVQTHPQGGVGGGGPTLVSSPRPSILRKKPANEGXVNQCGVGKNLIPAGPGEAT
SSRVEGGVRGAGPPRPAGVKPKAEGHMTMVAPPVPVMAAVESLPSQGGVEQQVVSSPAQA
IPSNLLALRAQAIPSNLLAPRGPPPLSQPSSNTHLSALSAAMAVTPPGPASMANTVASPT
QPAASSTAACSGGSAHTGVKIKQEAESMEMYQPVPQPSANSGLITQPRQAGSPHGTPSSG
DLVPGASPRKKPRKQQHVISTEETEMLETNSTDEDRAMGHRPLGSRAKRRESPPREYVDE
EGVRYVPVRPRPPVTLLRHYRNPWKAAYHHFQRYSDIRIKEEKESLQEVANQRGVARRAQ
GWKMHLCVAQLMQLSNLEHDVYSRLTSLQEGLIPKKRAGVDDELHRINELIQGNIQRCKL
VMDQVTEARDTMMKVLDHKDKVLKLLNQNGAVKKSNKLKRKDRA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagccatttcctacagctggaatgcctgctcagagtaatcctggtgaaaag
ccggtctccatcaatcagtcatccaaacagccagcaggaccaggtgaggacagtagtggt
gatgtggaccaccatggtcccgaggaccatccagccagcagcaggggaggagaagaagcc
ctgtcgttcagagaagacaagcaggagcccggagtggtcagaccctacccccaggtcccg
gttcagacccacagcctgcagtccccggtcccagctctgtcccagcaggtgcccaacaag
gcaggtacacctggtcaacctgtcaccgtcttcaaccctcctgtccaactactgcaggcc
cagactgctgccctcgttgacggacagatgaaggctgccctgaaatcgctgctacccagt
cgtctcatcgccccagctccagcctccagccagggccaggggggtcacatccctctccct
ctgcctcccaaggtgcagcctgccctgcttggccacatcactgtcaccctggagagccac
atcgctcccacctcctccatccccgtggcaaccatcagtggacaacagggccactccagt
aatcggcatcacctcgtgccagctaatatccagataattagatctccttctgttcctcaa
cacacattcacctctcacctaccaagaggggcggtggctgcagcagtgatgtccagctgt
aaagggcctgctgttctcagaccagcatcaggggccaatgcaggccccgttcagcacacg
gcacatcacgtcaaccaccagtctaaccagtctcgttcccctgtcaccagctctacagca
gtggtccccatctcagccacccggaaccagtcccctgtcatcaacccaatgttcacccag
tctgcagaggtgctgcatgggcatccagggctgaccatccaccctcctcctgccaccatc
agtatccaacgtccccagggggccagggacacagccacacgcatcaccctgccctcccac
cctgctataggggggcagaaaccccagccccctacccacaccatgacacagaaatccatc
ttctgttccgggactccggttgctgcagcaacggtggcacctattctaaccaccaccacc
actactggcccaggcaccaccactacaggcactgcgccacacacccagatgaccagcagt
actatcgtcaccatgacgatgcccacacactcctcccacgccacagcactgaccacctct
accatcccagttgctaaagtggtacctcagcccatagcccacacctccccccgtgtccag
tcagactaccttggagagaggaccaacctgatccagcctatagcccacacctccccccat
gtccaatcagactaccagcccatagcccacacctccccccgtgtccaatcagactatcct
gttgagaggaccaacttgatctccatctctggcaaccgctcctctcctaaccctgtcacc
atcgaggctaggagtgacaggccgcctgtaccagtgcacttccagtacttcctgcctacc
ttttcctcttctccttacccccggacacacacctacacccccatcaccagctccatgtcc
accatcagacagtacccagtgacgccccagaccccgagctctgctctgcccagccagcct
gctgtggccgtggccactgccgttcgcctcaaccccatgcagctgatggccgtggacagg
attggtcgacagtctgcacaaatcagcacccagggaatccagcctcaaccaattggagcc
cagggcatccagcctgcaccaatgggagtgcaggggttacatagctccggtccagtcggg
acacaggggattcagcaggcaccaatcgcagggcagcagcctgaggccaaaccatctggg
atggtattggctgacggcagtacatttgtagctgctcctatgggcagcccgtttggcgcc
gcacagcccgttgctaccatggtacagacacacccccagggcggagtaggaggcggaggg
cccactttggtctcttcccctcgacccagcatcctccgcaagaagccagccaatgagggg
tgagtcaatcagtgtggtgttggtaagaatctgatcccggcagggcctggtgaggctacc
agcagcagagtggagggaggagtgagaggagcaggaccacctagacctgcaggagtgaag
cctaaagcagagggtcacatgaccatggtggctcctccagtcccagtcatggctgcagtg
gagtctctaccctcccagggaggagtggagcagcaggtggtctcctccccagcccaggct
atcccctccaacctgctggccctccgtgcccaggctatcccctccaacctgctggccccc
cgtggtcctccacccctctcccagcccagctccaatacccacctctctgccctgtcggcc
gccatggccgtgacaccccctggccccgcctccatggccaatactgtcgcctcccccacc
cagcccgcagccagcagcacggcagcatgcagcggaggttccgcccacacaggggtcaaa
atcaagcaggaggcggagtctatggagatgtatcaaccagtgccccagccctcggcgaac
tcaggcctcatcacccagccccgccaggccgggtccccccacgggaccccctcctcaggg
gacctggttcctggtgcctcccccaggaagaagccccgcaaacagcagcacgtcatttcc
acagaagagactgaaatgttggagaccaacagtacagatgaggacagggctatgggccac
aggcccctgggcagcagggctaagaggagagagtcccctcccagagagtatgtggatgag
gaaggggtgcgttacgtccctgtcaggccgcgcccacctgtcactctgctgcgtcactat
aggaacccctggaaggcagcctatcaccacttccagaggtacagcgacatccggatcaaa
gaggagaaggagtcgttacaggaagtggccaatcagagaggagtagcacggcgagctcag
ggatggaagatgcacttgtgtgtcgctcagctcatgcagctgtcgaacctggagcatgat
gtgtatagcagactgacttcccttcaggaggggctaatccctaagaagagggccggggtc
gacgacgagctgcaccgcattaacgaactcatacagggtaacatacagcgttgtaagcta
gtgatggaccaggttacagaggcccgggacactatgatgaaggttctggaccacaaagac
aaggtcctgaagctgctcaaccagaacggagctgtcaaaaagtctaacaaactgaaacgt
aaggatcgggcctag
DBGET
integrated database retrieval system
