Oncorhynchus keta (chum salmon): 118375173
Help
Entry
118375173 CDS
T09424
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118375173 (rbfox1l)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118375173 (rbfox1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
118375173
NCBI-ProteinID:
XP_035617562
EnsemblRapid:
ENSOKEG00005017334
LinkDB
All DBs
Position
34:complement(77597069..77618335)
Genome browser
AA seq
393 aa
AA seq
DB search
MLSSPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEAGPGSGDPTLSQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSPAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDDALVPVTSDSQ
ALSVSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQTPLVNGEVS
TPGWKINPVMGAMYAPELYTGEFQFASFPYPVAAPTLAYRGSPLRGRGRAVYNTIRSAAA
AAPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPAAYRVAQSPSAATATYSDGYGRVYAAA
TDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggccggccccggcagt
ggtgaccccaccctctcccaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacacctgcaggcagacttcctcctctagactatagtcccgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcagggtccgcaacatgaaggggct
gacactctggcagccattagcacggacgatgccctggttccggtgacctctgactcccag
gctctgagcgtgtcagtgtcatcagggggtggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccacgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtagagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacttttgagagcgcaatggaggcagac
cgagcaagggaaaaactgaacggaactatcgttgaggggaggaaggttgaggtgaacaat
gctacagccagaatagtcaccaagaaaccccaaacaccacttgtgaatggtgaagtttca
acccctggatggaagatcaaccctgtcatgggagcgatgtatgcacctgaactctacacc
ggtgagtttcaatttgccagtttcccctaccccgtagctgctcccaccctggcctatcgg
ggctcaccactgcgtgggcggggccgggctgtctacaacacaattcgctcagctgctgca
gccgcacccactgccatgcccgcctaccctggaatgtctcctttcagtgtgctgtaccaa
gatggattatatggagctgaagtctatggcgggtatcctgcagcgtacagagttgcccaa
tcaccatccgctgccacagcaacatacagtgatggatatggccgagtttatgctgctgca
acggatccctaccaccattcagtgggacccacggcaacatacggcgtcggaacaatggcc
agtctgtacagaggaggatacaaccgcttcaccccttactga
DBGET
integrated database retrieval system
