Oncorhynchus keta (chum salmon): 118377819
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Entry
118377819 CDS
T09424
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118377819 (thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
118377819 (thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118377819 (thoc3)
03041 Spliceosome [BR:
oke03041
]
118377819 (thoc3)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118377819 (thoc3)
Spliceosome [BR:
oke03041
]
Complex C
Other components
EJC/TREX
118377819 (thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118377819 (thoc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
RMC1_N
eIF2A
NBCH_WD40
PD40
Peptidase_S9_N
Coatomer_WDAD
Nup160
DPPIV_N
IKI3
Cytochrom_D1
YNCE
Motif
Other DBs
NCBI-GeneID:
118377819
NCBI-ProteinID:
XP_052343445
EnsemblRapid:
ENSOKEG00005032995
LinkDB
All DBs
Position
30:9622507..9625589
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AA seq
322 aa
AA seq
DB search
MASKYYQEMQESFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNNMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK
EGKYDNNRESGTVKLFGLPNDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaatattatcaagagatgcaagagagttttagaaataacaacaaaagcagg
gaattccctgcgcatagcgctaaagttcattcagtagcatggagttgcgacggcaggagg
ttggcatctgggtcttttgataaaacagcaagcgtatttgtcttggaaaaagaccgtttg
gtgaaggagaacaactacagaggccacggagacagtgttgatcagttgtgttggcatcct
accaacccagacgtgtttgtcactgcatcaggggacaagaccatacgcatctgggacgtc
agaacaacaaagtgcacggctactgtcaacactaaaggggaaaacatcaacatctgctgg
agtcccgacggccaaacgatagccgttgggaacaaggatgatgtggttaccttcatcgac
gtcaaatcacaccggtcacgggctgaggagcagtttaagttcgaagtcaacgagatctcg
tggaataatgacaacaacatgttctttctcaccaatggaaacgggtgcatcaacatcttg
agttaccccgagctgaagcccatccagtcgatcaacgcccatccctccaactgcatctgc
atcaagtttgaccccacggggaagtactttgccacaggaagtgcagatgccctggtcagt
ctgtggaccgttgaagaactggtctgtgttcgctgtttctccaggttggactggccagtg
agaacattgagtttcagccatgatgggaagatgctggcttcagcctcagaggaccacttc
atagacatagcagaggttgaaacaggagagaagctgtgggaggtccagtgtgagtctcct
acgttcacagtagcctggcatcctaagagaccgctgctggcctacgcatgtgatgacaag
gaagggaagtacgacaacaatagagagtctggcacagtcaaactgtttggattacctaat
gattcctga
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