KEGG   Oncorhynchus keta (chum salmon): 118377819
Entry
118377819         CDS       T09424                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118377819 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    118377819 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118377819 (thoc3)
   03041 Spliceosome [BR:oke03041]
    118377819 (thoc3)
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     118377819 (thoc3)
Spliceosome [BR:oke03041]
 Complex C
  Other components
   EJC/TREX
    118377819 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    118377819 (thoc3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 RMC1_N eIF2A NBCH_WD40 PD40 Peptidase_S9_N Coatomer_WDAD Nup160 DPPIV_N IKI3 Cytochrom_D1 YNCE
Other DBs
NCBI-GeneID: 118377819
NCBI-ProteinID: XP_052343445
EnsemblRapid: ENSOKEG00005032995
LinkDB
Position
30:9622507..9625589
AA seq 322 aa
MASKYYQEMQESFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNNMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK
EGKYDNNRESGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtccaaatattatcaagagatgcaagagagttttagaaataacaacaaaagcagg
gaattccctgcgcatagcgctaaagttcattcagtagcatggagttgcgacggcaggagg
ttggcatctgggtcttttgataaaacagcaagcgtatttgtcttggaaaaagaccgtttg
gtgaaggagaacaactacagaggccacggagacagtgttgatcagttgtgttggcatcct
accaacccagacgtgtttgtcactgcatcaggggacaagaccatacgcatctgggacgtc
agaacaacaaagtgcacggctactgtcaacactaaaggggaaaacatcaacatctgctgg
agtcccgacggccaaacgatagccgttgggaacaaggatgatgtggttaccttcatcgac
gtcaaatcacaccggtcacgggctgaggagcagtttaagttcgaagtcaacgagatctcg
tggaataatgacaacaacatgttctttctcaccaatggaaacgggtgcatcaacatcttg
agttaccccgagctgaagcccatccagtcgatcaacgcccatccctccaactgcatctgc
atcaagtttgaccccacggggaagtactttgccacaggaagtgcagatgccctggtcagt
ctgtggaccgttgaagaactggtctgtgttcgctgtttctccaggttggactggccagtg
agaacattgagtttcagccatgatgggaagatgctggcttcagcctcagaggaccacttc
atagacatagcagaggttgaaacaggagagaagctgtgggaggtccagtgtgagtctcct
acgttcacagtagcctggcatcctaagagaccgctgctggcctacgcatgtgatgacaag
gaagggaagtacgacaacaatagagagtctggcacagtcaaactgtttggattacctaat
gattcctga

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