Oncorhynchus keta (chum salmon): 118384604
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Entry
118384604 CDS
T09424
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118384604
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118384604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
118384604
NCBI-ProteinID:
XP_035627168
EnsemblRapid:
ENSOKEG00005038821
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All DBs
Position
32:27376902..27418454
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AA seq
474 aa
AA seq
DB search
MLMSTDVASIMLPVSRGMMDREKDIDTATGPHANTTGGPAAIVRGMKRGDPEQTVAALTE
LAGAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPHSQGSQDSTGGQEGLVPPPFSVFP
PPPPPQNGLGTEFVGALFGAGGQGPSDSGAGTNGSATTSNILPTPQTEVSPGQVDGVGQC
VAVELAGVSGADSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSK
GFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALSTLPY
AGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYGAVRAAVPQ
PALPAYPGVVYQDGGFYGAADLYGGYPAAAYRFAQPTAVTGATAAAAAAAYSDSYGRVYT
TDPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgactgacgtcgcatccataatgttacccgtttctcggggaatgatggac
cgggaaaaggacattgatacagcaactggaccccacgcgaacacgaccgggggtccagca
gcaatcgtccggggaatgaaacgaggggatcctgagcaaacagttgcagctttgaccgaa
ttagcaggagcagagtgcaaacggccaaggatagacgggacggtgggtgttggtgacatt
ggacagaacaacgaccctttaaccccaggtttccttggatacccacctcacagccagggt
tctcaagattcaacggggggccaggaggggctggtgcccccgcccttctcagtgttccct
ccaccaccccctccgcagaatggcctggggacagagtttgtcggtgctttgtttggtgct
ggtggacaggggccttcggattcaggggctggaacaaatggctcagccaccacttccaac
atcttacccaccccgcagacagaagtgtccccgggtcaggtagatggagtggggcagtgc
gtggcagtagaattagcaggagtatccggggctgactccgcagaggccaaaggaacccca
aaacgacttcacgtctccaacatccccttccgcttccgagaccctgacctcaggcagatg
tttgggcaatttgggaagattattgatgttgagataattttcaatgagaggggctcaaag
ggctttggctttgtcacgtttgagaccagcgccgacgcagagaaagcccgggaaaggctt
cacggcacgctagtggaaggtcgcaagatagaggttaacaatgccacggccagggtgatg
accaataagaagatggtcagcccctaccccaacggagaggcccttagcaccctgccatat
gcagggtggaagctaagcccaatggtgcaggccatgtacggaccagagctctatgcagtt
cctgggttcccctacccgtctgcggcagcggcagcctccacggcagctgcgttccgtggt
gcccaccttaggggccggggaaggccagtgtacggcgctgtgcgtgcggcggtgccgcag
cctgccctccctgcctaccctggcgtggtgtatcaggatggtgggttttatggagctgca
gacttatacggaggctatcctgccgctgcctatcgctttgctcagcctactgctgtaacc
ggggcaactgctgccgcggcagctgctgcttacagtgacagttatgggcgagtgtacact
acagatccctaccacgctctaggtcctgctgcagctgcctatggagtcggtgccatggta
agagccccccagccgcaacactacaacaacaggctggaaactgagttatcttcactttat
gccagtttatatcgggctggatacagtaggtttgcgccgtactaa
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