Oncorhynchus keta (chum salmon): 118388862
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Entry
118388862 CDS
T09424
Symbol
fbxo42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118388862 (fbxo42)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
118388862 (fbxo42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
118388862
NCBI-ProteinID:
XP_035634289
EnsemblRapid:
ENSOKEG00005005009
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All DBs
Position
10:46394822..46407773
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AA seq
700 aa
AA seq
DB search
MSRSSDSEDGYFVAMDTEEDGSRPVGLAQEEEEKLGTNRRERDLEGLVEGERTMVELPEE
VLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQDGYIQWESRTYPYPG
TPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSP
KAGATLVMYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMA
GHSSSVIGSTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPTISGLSPHPRGGQSQIVVGN
ETLLILGGCGGPNALLKDAWLLHMGAPPWTWQQLRVENDDHGAPELWCHPACRVGQCVVV
FSQAPSGRAPLSPSLNSRPSPISASPAPLGTEPPSLRAYSPVRSGAAGVVLGAAEEAPCV
NGRWGTLRPRPSARGGAREGSPGSSSQQPSPSQGPDSPPLPSLHPLLDSSSPSPRTSPAQ
AASPPSHPPVSSDYGWESTLSATHPLSAEVLSTNGVHTPPPAPGSPLTPPGAVSPAALRR
GLEAVKNPSSSSMPSSSNPLSQGAATGVSGSGASAGTSPSSSSPPQVAADGHTIPPIARR
LGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKGDGLVSWRVYGNGTPAAVTGPPETS
LHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcctcagacagtgaggatggatactttgttgccatggatacagaggaagat
ggatcaaggcctgttggattggcacaggaggaagaagagaagctggggaccaacagaaga
gagagggacctagagggcttagttgagggcgagaggacaatggtggagctaccagaggaa
gtcctagaatacatcctgtccttcctttcaccttaccaagagcacaagaccgctgcactg
gtgtgtaaacagtggtaccgcctcatcaaaggtgttgcatatcagtgttaccatggtttt
ctgcgggccgtccaggatggctacatccaatgggagagtcgtacatacccatatcctgga
acacccatcactcaacgcttctcacacagtgcatgctactatgactccaaccagtccatg
tatgtgtttgggggctgcactcagagtagctgcaatgctgccttcaatgacctgtggaga
cttgacctcaacagtaaggagtggatccgccctttagcctcaggctcctatccgtctcct
aaagcgggggctaccctggtgatgtacaaagacctgctggtgctgtttggtggatggact
cgccccagcccctacccactgcatcaaccagagagattctttgatgagatccatacatac
tccccttccaaaaactggtggaactgcatcgtgacgacccacggtcccccacccatggcc
ggtcactcttcctctgtcatagggagcaccatggtggtgtttggagggtcactaggggca
cgccaaatgagtaatgaggtgtgggttctggatctggagcagtggtcctggtccaagcca
accatctctggcctgtccccccacccacgaggaggccagtctcagattgtggttggcaac
gagactctacttattctgggaggctgtggaggccctaatgcgctgctgaaggatgcctgg
ctcctccacatgggtgccccaccctggacgtggcagcagttgagggttgagaacgatgac
catggagccccagagctgtggtgccaccccgcctgcagggttgggcagtgtgtggtggtg
ttctcccaggctccttctggccgtgcgcccctcagccccagcctgaactctcggccctca
cccatcagtgcctctcccgctcccttgggcacggagcccccttccctgcgcgcctattcc
cctgtgaggagtggagccgccggggtcgtcctgggggccgctgaggaagccccctgtgtg
aacggccgctggggcacactgagaccccgtccctcggccagagggggtgccagagagggt
agccccggctcctcctctcagcagccatccccctcccagggtcctgacagcccgcctctt
ccatccctccatccactactcgacagctcgtccccctctcccaggaccagccctgcccag
gctgcctccccgccctctcacccccctgtctcgtcggactacggctgggaatctaccctt
tctgccacacaccccctttctgctgaggtactcagcactaatggagtgcacacacctccc
cctgctcctggctccccactcactccaccgggggcggtttcccctgctgccctgagacgg
ggcctggaggctgtcaaaaacccatcctcttcatccatgccatcgtcctcaaatccattg
tctcaaggggctgctacaggagtaagtggaagcggggcttcagcgggaacctccccctca
tcctccagcccaccacaggttgccgctgacggacacaccatcccgcccatcgcacggcgg
cttggccatcacccgccccagagcctgaacgtgggcaagcccctgtaccagtcgctcaac
tgcaagcccatgcagatgtatgtactggatgtgtcccgagccaaaggggacggtcttgtc
tcctggagggtttacggtaacggaacccccgccgccgtcacgggtccccccgagacgagc
ctccacacagtggtccaagggaggggtgagctcatcattttcgggggcttgatggacaag
aagcagaacgtgaagtactaccctaaaaccaacgccttgtactttgtacgcgctaagagg
taa
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