Oncorhynchus keta (chum salmon): 118389996
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Entry
118389996 CDS
T09424
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118389996 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118389996 (pom121)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118389996 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
118389996
NCBI-ProteinID:
XP_035635988
EnsemblRapid:
ENSOKEG00005002494
LinkDB
All DBs
Position
11:27809280..27817694
Genome browser
AA seq
1167 aa
AA seq
DB search
MSPREKRFTAFSSLVFCSIVIFCLVVYYIPTFFYIVFILGVCCVACIFHSGESLNARLGP
HPRHGLTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVFTDQRRSESAIYRKVAG
QSDSFLFSPRDILMGSYIGKAESPPSVVGRPRADANSRVNPNAREQLREILARPNHAVYT
PNKRLSFGRETHGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDSFKKKNILTSRNSPA
VHSPVTVKIARPDRNTSQSPFFDHLNSPGILGSPDLGAPADPCSRETVLSMLKESRKREV
DNEDDRSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPTQPVPKPGTLKRGLNAMTEESM
MKKSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQWKKASTRSLSPLSSPGSSR
SQTPERASKKPREEDARSPSSASSTRSDKTLMDPAPTTEKLTLAPEVHVASDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECVPEKSVPAPVV
TTSSQPPVSSDPTPTLATLLASPLSISTSASVVAPISVINLDPVPSSTAAPVTTTPVANP
LLESLKMMRNNSLASAAATTPAPAVSLVKVLMTPAPLVTSALQAETSLTAPQPTPASSFQ
PAPTSLSQPASTMSSAFIQVLSQVTKAPSRVPSLGGASLFGLANTLKAPSSSLAPTATTE
TTSSNNPLLASVFKPIFGPATPATESTPAVPTFKPIFGSATATSAFGQPAATSAPSTASA
SASLLSGLTNSSTVAPAASLFTGVSSSTAPAPVPSAVPAAPPSVKSLFGNWSAPPAMTSA
TTIAPATGSTFQFGSTTAPAPTLSSTAAATTSNNSFSFGAMTTTSAATQLAPPATAQGGF
TFGQAAATQNSTTASFSGFGMATAVTTTAAAPAIQSTFTFGKSSFDASTASAFPSATQAP
AAASAAANPFTFGSAGATPAPFAFGAAATTTASTFGTATKLAFGASSTGFAFGNTVAVPA
APAFGSATQTAGTLPASAPTFSFGGVSALQAPATPVQPTTGGFNFGAAISGTPFGTPNLT
TQTPGFNFGAAVSDKPAFGTSTPTFGQSTAAGPIAFGSPGTPVQGFSALAPSAFGSPSTP
SFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcacagcgtttagctctctcgtgttttgttctatcgta
atattctgtctagttgtgtattatattccaacctttttttatatagttttcattcttgga
gtttgttgcgttgcctgtatttttcacagcggagaatcactcaacgctaggttaggccct
catccacgccatggtctgactattccacccgtgctgcgacgctggttgccagagattgcg
aacggattacccacagcggggagagtcagaagtcgcacggtcaagggtgatgttagggaa
ccgctagtatttaccgaccaaagacgttccgagagcgctatttatcggaaagtcgcggga
caaagcgactcatttctgttcagtcctcgggatatactaatgggaagttacattgggaag
gcagaaagtcctccctcagttgttgggaggccgcgagccgatgcgaattcgcgtgttaac
ccaaacgcacgagaacaactgcgagaaatattggcgcgacccaaccacgctgtttatact
ccgaacaaaagactgtcatttgggagggagacccatggcatgatgggcaggttcaccata
actccccaacgccactaccccctccagcagaccggcacatcctctgtgggcatcctgcca
cctgcccagtgggacagcttcaaaaagaagaacattctcacctctcgaaactccccagca
gtccacagtccagtcacagtgaagattgctaggccagatcgcaacacctctcaatcccct
ttctttgatcatttgaactccccgggaatccttggttctccagacctgggggcccctgca
gacccttgctccagggagactgttctgagcatgctcaaagagagccgcaagagagaggtg
gacaatgaagatgacaggagcttcactgcagggcaaaagagcaaacggaggcgtcatgac
agcagtgggagtgctcactcggcatttgagccactgctgcccaatggggctcctacacag
ccggtgcccaagcctggtacgctgaagcgaggactgaacgctatgacggaggagtcaatg
atgaagaagtcgcgcacctcctccatcagttctgtgagctgtggcctgacccccagcggc
accctgggctcggtccgcaactccatccgcagctccctcagctcctcacaaggctttgct
cagtggaaaaaggcctccacccgcagcctctcccctctctccagccctgggtcatcccgc
tcccagaccccagagagagcctctaaaaagcccagggaagaggatgctcgctcccccagc
tctgcatcctcgacgaggtctgacaagacgttgatggacccagcacccaccactgaaaaa
ctgactctagccccagaggtccatgtggcgtcagactctgccggtagtgggaaacggaaa
cgcaagattccgctggtgtccagtcgtagaggagaccaaatctctctacctccacctcct
gagctgggctacaccatcactgtgaaagacctggatcaggagaaaaaagctgctctcagc
cagatcaacacagtcctcgaagagtgtgtaccagagaaatctgtgccagctccagtagtg
accacatcttctcaacctcctgtgtcaagcgaccccacacccaccctggccaccctgctg
gccagccctctttccatatcgacatctgccagtgtggtggctcctatctctgtgatcaac
ctggatcctgtcccctcaagcacagctgcacctgtcaccaccacccccgtggccaaccct
ctcctggagtctcttaaaatgatgaggaacaactcccttgccagtgctgctgccaccact
ccagccccggctgtctccttggtgaaagtattgatgactcctgcaccactggtgacttct
gctctgcaggcagagaccagcttgactgctcctcagcccacaccagcctcctccttccag
cctgccccaacctctctctcccagcctgccagcaccatgtcctctgctttcatccaggtg
ctgagccaagtcaccaaggcccccagcagggtccccagcctgggtggagctagcttgttt
ggcctggccaacacactgaaagccccttcctcctcactggcccccaccgccaccacagaa
acaaccagcagtaataatcccctcctggcctccgtgttcaagcccatcttcgggcctgcg
accccagccacagagagcacacccgctgtcccaacctttaagcccatatttggaagtgcc
acagccaccagtgcttttggacagccagctgctacctcagccccctccacagccagcgca
tctgcttcattgctcagcgggctcaccaacagcagtacagtggcccctgctgcctccctg
ttcactggggtgtctagcagcaccgctcctgccccagtcccctccgcagtcccagccgcc
ccgccatctgtcaagtctctgtttggaaactggagtgcgccgcctgcaatgacctctgcc
acgaccattgcccctgccacaggaagtactttccagttcggctccaccacagctcctgca
cccaccctcagctccactgcagccgccaccactagcaacaacagcttttcgtttggtgcc
atgaccaccacctctgctgccactcaactcgcccccccagccaccgcccaggggggattt
acctttggccaggctgcagccacccaaaactctaccaccgcatccttcagtggctttggc
atggccactgcagtcactactactgctgcagcacctgcaatccagtccacgttcacgttt
gggaagtcatcattcgatgcctccacagcatcagcgttccctagcgcgactcaggccccg
gctgctgcttccgcagcagctaatcctttcacatttgggtcagctggggccacccctgcc
cccttcgcttttggtgcagctgccactacgacagcttctacatttgggaccgccactaag
ctggcatttggagccagctctacaggttttgcatttggcaacactgtggctgtcccagca
gcccctgcctttggctctgccactcagactgccggcacactcccagcctctgccccaacc
ttctcgtttggtggtgtgtctgcactgcaggcccccgctacccctgtccagccaaccacc
ggaggattcaacttcggcgcagcaatttcaggcactccgtttggaacacccaacctcaca
acacagacaccaggcttcaacttcggggctgctgttagtgacaagccagccttcgggacg
tctacccctacttttggccagagcacagctgcaggtcctatcgcctttggaagcccagga
actccagtccaaggattcagtgctttggcaccctcagcattcggctctccatcaactccc
tcgttctccattggcgctggctccaaaacatcaggggcacgccagaggctacaggcccga
aggcagcaccccaggaagaaatag
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