Oncorhynchus keta (chum salmon): 118391487
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Entry
118391487 CDS
T09424
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118391487
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118391487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118391487
NCBI-ProteinID:
XP_052314199
EnsemblRapid:
ENSOKEG00005003097
LinkDB
All DBs
Position
12:39219391..39252708
Genome browser
AA seq
1411 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAAMPSPTPQSISISALGVDSGMEPTGVTAP
PNPTGTIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHTTPSAL
RGSTSTSSTALPSAVSTVVSSSLEQIQLKDLLRTGGLKGSTMKGSSLVELMRLKPPHDIA
QPVATAIATGTKIILVSTKMMHKTAELNNGIKEVSGKDSARVCVNDDVKVRSFSPTLKLP
GMEEEVEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPNVWYRMSIPE
ETIDRGWLSALQLEAITYASQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLG
RKRSLWFSVSNDLKYDAERDLKDIGAKNIPVYSLNKFKYGKISSKHNGSVKKGVIFATYS
SLIGESQSGGKYKTRFKQLLHWCGQVFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLEL
QNKLPKARVVYASATGASEPRNMAYMSRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVA
MDMKLRGMYIARQLSFTGVTFKIEQVPLTTHYIKMYNKSVHLWVAAREKFQAAANLMDAE
QRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEA
LEEGGGELNDFVSTAKGVLQSLVEKHFPAPDREKLFSLLGIDLPAMKIPFPSEAAAEQKR
KGVNVKKAEKRKRKSGGLSGNSSDDSKSEESHKDDAESDDSFKSVSSGEDDEDDFNPFKD
DSSEDEEDDPWLSGKRKGVKKCKEKKKKKSIDPDSIHSALLASGLGSIRPAFTTPPVKTS
STPAIAKVEVDDSCMTSQDAVEDAQQMKRDLLDQLDKLAQDLPPNTLDELIDELGGPDNV
AEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGIS
LQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFAS
IVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDFPLVNPPSNF
EGDFYKEILHGLIGVGLIHVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQYFSD
TLAAVIQNAKKNGRYDMGILDLGSGDEKVKKMEAKKFLTPGYSTSGHVELYTVSVERGMA
WEDATHAWAEQSGPDDGFYVQIRNNKKTAILVKEVNSKKRLFLVYRPNTGKQLKLEAYAD
IKKKCKKVLSDDAKQHWMDQYQSSAEICSHAYWRGNCKKVSVGLQCEVGLRCRTYYVLCG
SVLSVWTKVEGVLASVSGTNIKMQIVRLRTEDGQRIVGLIIPINCVSPLTNILSSSDQSQ
QLAVQQQQKWQQLHPQSLSHMHNMGSPPSLT
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcctagcagccctgagcgagagcggcatctgcccc
aacgacctgtttgactttgaccctcaggatgctgcaatgccctctcccaccccacagtcc
atctccatcagtgccctgggtgttgactcggggatggagccaacgggagtcacagctcca
cccaatcctacaggcacaatcaggcacaaacctcaaccctcaaccaccacatttgtctta
aatcaactgaatcagttgccatcgctgggaacaatcgttgtgaccaagccctcaactgga
ggcactgccagacataccatcacagtcaccaaggtagtccataccactccctcagccctg
cgggggtccacttccacctcctccacggctctcccctccgcagtctccacagtggtttct
tccagtctagagcagatccagctgaaggacctgttgaggacaggcggtctgaagggcagc
accatgaagggtagtagtctggtggaactcatgaggctcaagccgcctcacgacatcgcc
cagccggtcgccacagcaatagccacaggcaccaagataatactggtctcgacaaagatg
atgcataaaacagcggaactgaacaacgggataaaggaggtgtcgggtaaagactccgct
cgggtctgtgtgaacgacgacgtgaaagtgcggagcttctcacctacactaaaactccca
ggaatggaggaggaggttgaggaagaggaggatgaagagttgggtcatgctgagacatac
gccgagtacatgcccatgaaattgcggatcgggctgcgtcacccagacccggttgtggag
acaagctccctgtccagtgtgaatcctcccaacgtgtggtacagaatgtccataccggag
gagaccatcgaccgtggctggctgtctgctctacagctggaggccatcacatacgcttcc
cagcaacatgaaacattcctccctaacggcgaccgagcgtcctatctgataggagacggg
gccggagtggggaagggccggaccatcgctgggataatctacgagaactacctcctgggc
agaaagagatcactctggttcagtgtttctaatgacctgaagtatgatgcagagagggat
ctgaaagacataggagccaagaacattccagtctattccctcaacaagtttaagtatggt
aagatctcgtccaaacacaacggcagtgtgaagaagggggtgatcttcgctacgtactcc
tctctgataggagagagccagtctggagggaagtacaagacgcgcttcaaacagctgctc
cactggtgtggacaggtcttcgacggagtcattgtttatgacgagtgtcacaaagcaaaa
aatgtctgtcccattggctcgtccaaacccaccaagactggactggccgtcctggagctg
caaaacaaactgcccaaggcgcgggtggtgtacgctagcgccactggtgcgtctgagccc
cgtaacatggcctacatgagccggctgggcatatggggggaggggacccccttcagagag
tttagcaacttcattcaggctgtggagcgccgaggtgtgggtgctatggagatagttgcc
atggatatgaagctgagggggatgtacatcgccaggcagctgagcttcacgggtgtcacg
ttcaagattgagcaggttcctttgacaacccactacatcaagatgtacaacaagtctgta
cacctgtgggtggctgcgcgggagaagtttcaggcggctgctaacctgatggatgcagag
cagcggatgaagaagtccatgtggggtcagttctggtcggcccaccagaggttcttcaag
tacctctgcattgcgtccaaggtccgcagggtggtgcagctcgccagggaggaggtcaaa
aacggaaagtgtgttgtgattggtctccagtcgacaggagaggccagaacactggaggcc
ctggaggaaggaggaggagagctcaacgactttgtctccaccgccaaaggtgtgctccag
tccctggtagagaagcacttcccagctccagacagagagaagctgttcagcctgctgggc
attgacctgccggccatgaagatccccttccccagcgaggctgcagcagagcagaagagg
aaaggtgtcaacgtaaagaaggcagagaagaggaagagaaaatcaggtggtctgtcgggg
aacagctctgatgacagcaaatctgaagagtctcataaggacgatgcggagagtgacgac
agcttcaaatcggtcagctcgggagaagatgacgaagacgacttcaatcccttcaaggat
gattccagcgaggatgaggaggatgacccctggctgtctggaaagaggaaaggggtgaag
aaatgcaaggagaagaagaagaagaagagcattgacccagactctatccacagtgccttg
ttagcttctggtctgggctccatcaggcctgctttcaccacccccccagtcaagacctcc
agcacacctgccatagccaaggtagaggtagatgacagctgtatgactagtcaggatgct
gtggaagatgctcagcagatgaagagagatctgttggaccagctagataagctggctcag
gatctacctcccaacactctggatgaactcatagatgagctgggaggacccgacaacgtg
gctgagatgactgggcgtaaaggccgggtggtcagtaacgacgatggcagcatctcctac
gagtctcgatctgagctggatgttcctgtggagatcctcaacctcacagagaaacagagg
ttcatggacggagagaagaacatagccatcatctcggaagcggccagctcgggcatctcc
ttgcaggctgaccggcgagtaaagaaccagaggaggagggtccacatgaccctggagctg
ccctggagtgcagacagagccatacagcagtttgggaggacccataggtctaaccaggtg
actgctcctgagtatgtgttcctcatctctgagctggctggggaacagaggtttgcctcc
attgtggccaagagactggagagcctgggtgccctcacccatggagacagaagagcaaca
gagacgagagatctcagcaggtttaacttcgacaacaaatatggcagaaatgctctggag
attgtgatgaagtccatcgttaacctggactttccgttagtgaatcctccatcgaacttc
gaaggggatttctacaaagagatccttcatgggttgatcggagtgggtctgatccatgtg
gaggacagatcagggatcctgtctctggacaaagactacaacaacatagggaagttcctg
aaccgtatcctggggatggcggtgcaggagcagaacgctctgttccagtacttttctgac
acgctggcagccgtcatacagaatgccaagaagaatggacgctacgacatgggcattctg
gacctaggttctggggatgagaaggtgaagaagatggaagccaaaaagttcctgactcca
ggctactccacctccggacatgtggagctctacacggtgagtgtggagagaggcatggcc
tgggaggatgctacccatgcctgggctgagcagagtggacccgacgatggcttctatgta
cagataaggaacaacaagaagactgctatcttggtgaaggaggtgaacagtaagaagagg
ctgttcctggtctacagacccaacacaggcaaacagctgaaactggaggcctatgctgac
atcaagaagaagtgtaaaaaggtgctgtcagatgatgccaagcagcactggatggatcag
taccagtcttcagctgagatctgctctcatgcttactggcgtggtaactgtaagaaggtg
tcggtgggtctgcagtgtgaggtgggtctgcgctgcaggacgtactacgtgctttgtgga
tctgtgctcagtgtgtggaccaaggtggagggagtcctggcctccgtcagcggaaccaac
atcaagatgcagatcgtccgtctcaggacggaggacgggcagaggattgtgggcctgatc
attccaattaactgcgtctctcctctgaccaacatcctgtcgtcgtctgaccagtctcag
caactggccgttcagcagcagcagaagtggcagcagctgcaccctcagagcctcagccac
atgcataacatgggttcaccacccagtctgacctga
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