Oncorhynchus keta (chum salmon): 118391597
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Entry
118391597 CDS
T09424
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118391597
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other basic domains
RF-X
118391597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Cdc6_C
HisKA
Motif
Other DBs
NCBI-GeneID:
118391597
NCBI-ProteinID:
XP_052314106
EnsemblRapid:
ENSOKEG00005008766
LinkDB
All DBs
Position
12:36125688..36165856
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AA seq
765 aa
AA seq
DB search
MQTPEAGAESASTVHTAVPVQSAGSAQQVSSQAQTVQQVQHVYPAQQVQYVEENSGVYTN
GNIRTYSYSEPQLYSQNSGGSYFDTQGSSSQVSTVVSSHGMANNGGGNGGLTMGMAGGQI
ISSSGAYLIGGNTMDNSAPHPAAQTTRASPATVSIEMAIETLQKTEGLSSQRSSLLNSHL
QWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTR
GNSKYHYYGIRLKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPMQKVDGVSGENFSGGGQ
HTPSAAEQTVIAQSQHHQQYLDTSRALPDFVELDLGETNVDNVGPDDIKALQSLYREHCE
AILDVVVNLQFSLIEKLWQTFWRYSPSDSVEGATITENSGVSEIEGRLPCCRLLVLCRNE
AVLKWMSSCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNTIPQRMI
QTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC
QCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQVLQPFEDRPSFPRAARQFLLKWS
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGQTPISVMGEFDDLNA
MSPANIDKDEVSEMDSDLEEDMEESGEPLAKREKAEVEHEHQVIQVIQVGALEDGSNPVV
GVLQPGILHSLPQPPQNHAEHILTTSAATTTIRHCSATGNTYASV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaggcaggcgctgaatccgcctccactgtccacaccgctgtgcctgtg
cagtctgcaggctccgcccagcaggtgtcctctcaggcccagactgttcaacaggttcag
catgtatacccagcacaacaggtgcagtacgtggaggagaacagtggcgtctataccaac
gggaacatacggacatactcgtactccgagccccagctgtacagccagaacagtggaggg
agctactttgacacgcagggcagctcatcccaggtgtccacggtggtgtcatcccatggc
atggccaacaacggaggggggaacggggggctgaccatgggtatggctggggggcagatc
atcagcagctctggggcctacctcatcgggggcaacaccatggataactctgccccccac
ccagcagcccagaccacccgagcctccccggccactgtgagtattgaaatggcgattgag
acgctccaaaagactgaaggtttatccagtcagagaagctcactactcaacagccatctg
cagtggctactggataactatgagacagcggagggggtgagtctgcctcgctccaccctc
tataaccactacctgcgccactgccaggagcagaagttggacccggtcaacgctgcttcc
tttggcaaactcatccgctccatcttcatggggctccgcacgcgtcgcctgggcacacga
gggaactcgaagtaccactactatgggatccggttgaagccggactctcctctcaacaga
ctgcaggaggacatgcagtacatggccctcagacagcagcctgtccaacagaaacagagg
tttaagccgatgcagaaggttgatggtgtatctggggagaacttctcaggcggaggccag
cacacccccagtgcagcggagcagactgtcatcgcacagagccagcaccaccagcagtac
ctggacacatctcgggccctgccagactttgtggagctggacctgggagagaccaacgtg
gacaacgttggcccagacgacatcaaagctctccagtcactctacagagagcactgtgag
gccattctggatgtggtggtcaacctccagttcagtctaatagagaagctgtggcagact
ttctggcgctattctccttctgactcagtggagggcgccaccatcacagaaaacagtggt
gtgagtgagattgagggccgtctgccctgctgcagactgctggtgctctgtaggaacgag
gctgtgctcaagtggatgagttcctgtgaccacctgatgtaccaggccctagtggagatc
ctcatccctgatgtcctcagacccatccccagtgccttgactcaagccatccgcaacttt
gccaaaagcctggaaggctggctcaacaatgccatgaacaccattccacagagaatgatc
cagaccaaggttgccgctgttagtgcctttgctcagacgctgcgtcgctacactagtctg
aaccacctggcccaggcagcacgcgccgtgctgcagaacacctcccagatcaatcagatg
ctcagcgacctcaaccgcgtcgacttcgccaatgtgcaggagcaggcgtcgtgggtgtgt
caatgtgaggagggtgtggttcagaggttagagcaggacttcaaggccaccctgcagcag
cagagctctctggagcagtgggctgcctggctggacaacgtggtcacccaggtcctacag
cccttcgaggacagacccagcttccccagggcggcacgacagttcctgctcaagtggtcc
ttctacagctccatggtgattcgggacctgaccctgcgcagcgcagccagttttggctcg
ttccacctgatccgcctgctctacgacgagtacatgttctacctggtggaacaccgcgtc
gcccaggcaaccggtcagacacctatcagtgtcatgggagaattcgatgacctcaacgcc
atgtcacctgcgaatatagacaaagacgaggtgagtgagatggacagtgacctggaggag
gacatggaggagtccggggagccgctggccaagcgggagaaggctgaggtggaacatgag
caccaggtgatccaggtgattcaggtgggggctctggaggacggcagtaaccccgtggtg
ggggtgctccagccgggcatcctgcactccctgccccagcccccccagaaccatgctgag
cacatcctcaccacctccgccgccaccaccaccatccgccactgcagtgccaccggcaac
acctacgcctccgtctga
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