Oncorhynchus keta (chum salmon): 118392376
Help
Entry
118392376 CDS
T09424
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118392376
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118392376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
118392376
NCBI-ProteinID:
XP_035640213
EnsemblRapid:
ENSOKEG00005004599
LinkDB
All DBs
Position
13:43144655..43152209
Genome browser
AA seq
941 aa
AA seq
DB search
MVQLSPSPDRDVSPSPECSEKGRQGSPNIGSPGGLSPLQLALAASTTIYQGYESYIEDGL
ICLKHKIRNLEKKKIKLEDYRKRLQHGESLNQDQIDAAEKYDEVIHNLQFAQELHKTLGG
LTQELLKAQKKALRKEQMVKQEVERRRLCIVLQVKFLLQTLLQHEHIRKDLLSARNPQLK
VAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGKNKAVAGTTYKVLKAKLAT
LMDCGYFDCVPPPPTKSPKEVEVPMTKKTVSETASLSTLMMSTKKDVPSREFLNRHYLPD
TDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISKVPVTS
KKQNAEPKQRRVKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGS
FSFMQDSLLDGEGSSTNGHPRLGRHASGSPSPLVQRESRRSPVDLLPKTLHSTPLLSKLL
PVDDKPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSLPAPPPLYRRE
SSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTQGQPFSTPPSRRTLTMAPPVPFQT
MHSVFKVNAPLLPTVDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEQLQSVNQSECL
VGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSFIPQA
HLYGARDIGYQHSYRRGGGNTGQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVG
MDLTTQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSNL
GEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETA
SNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccatccccagaccgggatgtctctccttcacctgagtgctcagag
aaggggaggcaggggagccccaatattggctcccctggtgggctgagtcctctccagctg
gccctggcagcctccaccaccatctaccagggctacgagagttacatcgaggacggcctc
atctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactac
aggaagcgtttgcaacacggggaatcactcaatcaagaccagatagatgcagcggagaag
tatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggc
ctaacacaggaactgctgaaggcccagaagaaggcgttgaggaaggagcagatggtcaag
caggaggttgagaggagaaggctgtgcatagtgctgcaggttaagttcctcctgcagacc
ctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaag
gttgcagagctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaac
aatgtgagtttagaggatcagatggacagagcagccctggtctacctggacctgctggag
gggaaaaataaagccgtagccggaaccacctacaaggtcctgaaggctaagttggcgacg
ctgatggattgtgggtactttgattgtgtaccgccgccaccgaccaagagtcccaaggaa
gtggaggttcccatgaccaagaagacggtgtccgaaacagccagcctctctaccctaatg
atgtcaaccaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacactcccgttactccgaactggaaggctgagttccag
gctatgaaggaacaggagccaccagactcatgggatatggagtccgactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttcatctccaaagttccagttacctcc
aagaaacaaaatgccgaacccaaacagagaagagtgaagtccaaaagggagcgggacgcc
acagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatcagaggctcc
ttcagcttcatgcaggattctcttctggatggagaaggatcatccactaacggccatcct
agactgggccggcatgcctctggatccccctctccactcgtacagagagagtcgaggaga
agcccagtggaccttctccctaaaacactgcattccactccattgctttctaaactcctc
cctgttgatgacaaacccagtctgaccaatggagacgggggttgtctagagagctgtgac
ctggacctgacaacagaggacctggctcacgtcatagccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcttccagctcctcctcccctctaccgtagggag
tcctccatctccatcaccctggacgagaagacctctgctcggactcccatctctgaatcc
ggtaagcaatccccctgtaacggggtggtgcctccttgtacccccacccaagggcagccc
ttttcaacccctcccagcagacgtacgctcaccatggcgccccctgttcccttccagacc
atgcattcggtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgat
attatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccagacccca
ccggagtttgctccgtcagaggacgaacaactacagtcggtgaaccagtctgaatgtctg
gtaggtagtggtgggcagatcttcctgtcccctggccaatcgggtggcaccatgggccgt
tctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctg
gcacactcctactttcgctcttctggtgggcacagaggaggaagcttcatcccccaggct
cacctgtacggagctcgggatattggctaccaacacagctacaggcgcggtggaggcaat
acaggacaaaggcacaataatagtggttggagtgattcttcccaggtgagcagcccagac
cgggagggcaactactccctggtggactccgcccacggtgactcgctgcagggtgttggc
atggacctcaccacccaggtgacccctcatgccccccacaccctgatgcacgtacccatg
tacccgctcccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagcc
aactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctg
ggggaaatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacctacgtc
ttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgc
aacgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacggcc
agcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgc
ggctccatctatggcagcagctggaagtacagcacattctctggcttcctgctctaccag
gactga
DBGET
integrated database retrieval system