Oncorhynchus keta (chum salmon): 118394163
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Entry
118394163 CDS
T09424
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118394163 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118394163 (usp47)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118394163 (usp47)
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118394163 (usp47)
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118394163 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
118394163
NCBI-ProteinID:
XP_052318184
EnsemblRapid:
ENSOKEG00005043782
LinkDB
All DBs
Position
14:complement(67627911..67651255)
Genome browser
AA seq
1401 aa
AA seq
DB search
MEMVPSEENQLVPKEGMFWSCRQSIFNEMKKRFSQIENASEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLSKLFEDVAHKASYVNGTFDLAWGKTGDMGSLDPSSETSLTESGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDSSQERFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQA
FVQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMGPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKVPNLNTSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSK
ITQEDIRKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCEDFPEHIKHLV
QREKESEEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLM
ELDGVVPLDCCRLVKYDEFHEYLERSYEGEDDTPMGLLLGGVKSSYMFDLLLETRRAEQV
FQPYKPGEVMVKVHVVDLKTDTIAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLE
RCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLF
VSLPVQSPGTNRTICQKVGGETEECSEGSKGNRNSVETILEESTEKLKNLSLQQQQGSST
SDSQKSSDTSDFEHIESPSPSQEPDSSSVSAVVAVDNRELENRIRAASGGSGGGAYSDPE
TQFPGEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRR
SKANEGKKETWDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLV
HVDKRITLSAFKQNLEPFVGVTSTQFKVFRIYANNQEFESVRLNETLSSFSDDNKITIRL
GRALKKGEYRVKVYQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNID
KFRLRKKTWKNPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTP
AQMKLEPFQEVVLESSSVEELKEKLSEISGIPLENLEFAKGRGTFPCDISVLEIHQDLDW
NPKVSTLNVWPLYICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGHRVSYSP
RKEKALKIYLDGGPVKDPGQD
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagagggtatgttttggagt
tgcaggcagagtattttcaatgagatgaagaagaggttttctcagatagagaatgcgtca
gaggagcccagagtgctgtgtatagtccaggacactaccaatgctaagacggtcaacgag
aggctcaccctcaacctgccagcctccactactctctccaaactctttgaggatgtggcc
cacaaggcgagctatgtgaacggcacctttgacctggcatggggcaagaccggggacatg
gggtcgctggatcccagcagtgagacgtccctcactgagtctgggttcgagcccgggaag
aggaacttcctccagctcacagacaaggacggagaacagcctcagattgcatcggatgag
tcggggacagcgggcagcagtggtctggatgacagctcacaggagcgcttcatcggcccg
ctgcccagagatggcacggtgggctgcagcagcgactacagcagccccagctattcctac
tcctccatcctcaacaagtctgacacaggatatgtgggtttggtgaaccaggccatgacc
tgctatttgaacagccttctacaaactctgtttatgaccccggagttcagaaatgcactg
tacaactgggaatttgaggagtcggaggaagacccggtcaccagcatcccttaccagcta
cagaggctgtttttgctcctgcagaccagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccctggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctgtaccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctg
gtcatcagaccctttggggccagccaggcttatggcagcgtggaggaggctctacaggcc
ttcgtccagccagagactctggatggggccaaccagtatttctgtgagcggtgcaagaaa
aaatgtgatgcccgtaaggggcttaggtttctgcactttccctacctgttgactttgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgaccgcatg
tccttccctgaggagctggacatgggtcctttcattgacgtggaggatgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagtgaccag
atgagcaacgacttctcggcagacgacggtgttgatgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaaggtacccaacctcaacactagttcattgacc
tttgagctgttctcggtcatggtccattcgggcagcgctgcaggtggccactactatgcc
tgcattaagtccttcagcgatggccagtggtacagtttcaacgaccagcacgtcagcaag
atcacccaggaagacataaggaaaacatatggagggtcctcggggagcagaggctattac
tccagtgcctttgccagctctacaaatgcgtatatgctgatttataggttgaaagacccc
tcaaggaatgcaaagtatctggattgtgaggacttccctgagcacataaagcatctggtc
cagagggagaaggagtctgaggagcaggagaaaagacagagggagatcgagcgcaatacc
tgcaagatcaagctgttctgcatgcatccggtgaagatgatggctatgatggagaacaag
ctggaagtgcacaaggacaagacgctcagagaggcaacagagatggcctacaagctcatg
gaactggatggggtggtcccgctggactgctgtcgcctggtcaagtacgatgagttccat
gagtacctggagcgttcgtacgagggcgaggacgacacccccatggggctgctgctgggc
ggggtcaagtcctcctacatgtttgacctgctgctggagacccgcagagctgaacaagtc
ttccagccatacaaacctggagaggtgatggtgaaggttcacgtggtggatctgaagacg
gacactatcgcccctcccgtcagcatcagggcctatctaaaccagtcaattactgagttc
aagcagctcattgcacaggccacagagctctcagccgaaaccatgcgtgtcgtcctggag
cgctgctataatgaccttcggcttctctacgtgcccaacaagacactgaaagcagagggt
ttcttcaggagcaacaaggtttttgtggaaagctctgaatccccagatcaccaggtcacc
ttcactgattccctcttgtggaaactgctggatcgccatgggaacacaatccgcctgttt
gtctcgctgcctgtgcaatcccccggcaccaaccgaactatttgccaaaaagttggtggc
gaaactgaggagtgctctgaggggtcaaagggcaacaggaattccgtagagaccatcctg
gaggagagcacagagaagctgaagaacctgtccctccagcagcagcagggctccagcacc
agtgacagccagaagagctcagacaccagtgacttcgagcacatagagtccccctcaccc
tctcaggaaccagactcctcctccgtatctgctgttgttgcagtcgacaaccgagagctg
gagaaccggatccgggcggccagcggggggagcggcgggggggcctactctgacccagaa
acccagttccctggggaggagcgctcagactctgaggtgaacaacgaccgcagcacgagc
tcagtggacagtgacatcctgagctccagccacagcagtgacacgctgtgcaacgctgac
agcggccccattcagctggccaacggcctggactcacacagcatcaccagcagccgccgc
tccaaggccaacgagggcaagaaagagacgtgggacacagccgaggaggacagtggcacg
gacagcgagtatgacgagaacgggaagagcaaggcagaatcctattacctctacttcaga
gcagaaccatatgcacaggaggacggctctggggaaggaggccagaaatgtgtactggtc
cacgtggataagaggataactctgtcagcattcaaacagaacctggagcctttcgtgggg
gtcacctctacccagttcaaagtgttccgcatctacgccaacaaccaggagtttgagagt
gtacggctcaacgagaccctctcctccttctctgacgacaacaagataaccattcgatta
ggcagagcactgaagaagggcgagtatcgggtgaaagtgtaccagctactagtgaatgat
gcagagccctgtaagttccttgtggacacagtgtttgctaagggcatgactgtgaaacag
tccaaagaggagctaatgcctcagctgaaagaccaatgcaagctggacctcaacatcgac
aagttccgtctcaggaagaagacgtggaagaacccagggacagtgtttctggactaccac
gtctacgaggaggacatcaacatctccagtaactgggaggtctttctggaggttctagat
ggaccggagaagatgaagtccatgtcccagctggctgtgctcacccgccgctggaccccc
gcccagatgaagctggagcccttccaggaagtggttctggagagcagcagtgtggaggaa
ctcaaggaaaagctcagtgaaataagtggtattcctcttgaaaacctggagtttgccaag
gggcgtggaacatttccttgtgatatctcggttttggagatccatcaggatctggactgg
aaccctaaagtgtccactctgaatgtgtggcctctgtacatctgtgatgatggtgctgtg
gttttctacagggacagcacagaggagcctatggaacagtcggaagatgaacgcaatgag
ctgatgaagaaggagagcagccggctgctgaagactggccaccgggtcagttactcacct
cgtaaggagaaggcccttaagatctacctggatgggggcccggtcaaggacccggggcag
gactga
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integrated database retrieval system
