Oncorhynchus keta (chum salmon): 118396439
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Entry
118396439 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118396439
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118396439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-rbx1
ACCA
KorB
HSP70
Not3
USP8_interact
Sina_RING
Motif
Other DBs
NCBI-GeneID:
118396439
NCBI-ProteinID:
XP_035646547
EnsemblRapid:
ENSOKEG00005048929
LinkDB
All DBs
Position
17:11524232..11529922
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AA seq
555 aa
AA seq
DB search
MAEAVFDKDLITCSICLDPLKDPVTTACGHSYCMGCIKESWDQDDGKGVYSCPQCRQTFT
PRPVLGKNTLLNELVEKLKMTGQAAPPAYCYAGPLDVGCDICAGRKLKAVKSCLLCLASY
CATHLKLHNDLNQGKKHKLIDATRLQEKICTRHDKLLEVYCRTDQQCICLLCVIDDHKGH
DIVAAAEERTEKQKQLGGNNLKSQQRIREREKEMQELRQAVDSLKRSAQAELFDSERTLT
ELIHSVEKRRSEVKELISAQEKAQVSRAKRHLKQLEQEVAGLRRRDAELKHLSHTEDHIH
FLQHFQSLCVPLGSEGTPSIIVTFEHVTKFVTELKERLQDICKEEMDRIYGKVTKVPNIR
PSVPKTREEFLEYCCPLTLDPNTANKLLCLSEGNRKVTRSHKIQTYPNHEHRFSHWKQVL
CKEGVWSVSEPCYWEVEWTGVEVDVAVSYKGISRRGSGHECLFGANDQSWRLYCSATRCC
FYHNGRETSIPAIRSDSRVGVYLDHGAGTLSFYSVTVSDSMTLLHGVKTTFTRPLYPGFG
VGSSVRILTPFLSSN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctgtttttgataaggatttgattacctgttcaatctgtctggatccactg
aaggatccagtgactactgcctgtggacacagttactgtatgggctgcattaaagaaagc
tgggatcaggatgatgggaaaggtgtctacagctgtccccagtgcaggcagaccttcacc
ccaagacctgttctggggaaaaatactctactgaacgaattggtggagaaactgaagatg
acaggacaagctgctcctcctgcttactgttatgctggacctttagatgtggggtgtgac
atctgcgctgggagaaagctcaaagctgtcaagtcctgtctgctgtgtcttgcctcttac
tgtgcgactcacctaaaacttcacaatgacctcaaccaaggaaaaaaacacaagttgatt
gatgctactcgactacaggagaagatttgcactcgccatgacaaactgctggaggtttac
tgtcgtaccgatcagcaatgtatctgtctgctgtgtgtgattgatgatcataaaggccat
gatatagtcgccgctgcagaagaaaggactgaaaaacagaagcagttggggggaaataat
ctgaaatcccagcagagaatccgggagagagagaaggagatgcaggagctgagacaggct
gtggactcattgaagcgctctgcacaagcggaattgtttgacagcgagaggaccttgact
gagctcatccactctgttgagaaaaggcgctctgaggtgaaggagctgatcagtgcccaa
gagaaggctcaagtgagtcgagctaaaaggcatctgaagcaactggagcaagaggtcgct
ggactgaggaggagagatgctgagctaaagcacctgtcacacacagaagatcacatccat
ttcctccagcatttccagtctctctgtgtccctcttggatctgagggcacacccagcatc
attgtcacctttgagcacgtgacgaaatttgtcactgaactgaaagagcgactacaagac
atctgcaaggaggaaatggacagaatatacgggaaagtgactaaagttccaaacattcgc
ccttctgtgcccaagaccagagaggagttcttagaatactgctgcccgctgacattggat
cccaacacagcaaataaactcctgtgtctgtctgaggggaacagaaaggtgaccaggagt
cataagatccagacctatcccaaccatgaacatagatttagccactggaaacaggtgttg
tgtaaagagggtgtctggagtgtgtctgaaccctgctactgggaggtagagtggaccggg
gtggaggttgatgtagccgtctcatataaagggatcagcaggagaggaagtggtcatgag
tgtttgtttggtgctaatgaccagtcctggaggttgtactgctctgcaactagatgctgt
ttctaccataatggtagagagacttctatccccgccatccgctcagactccagagtcgga
gtgtacctggaccacggggcaggaactctgtccttttacagcgtgactgtctcagactcc
atgaccctcctccacggagtcaagaccacgttcactcggcccctctaccctgggtttggg
gttggttcatctgtgaggatactgacaccatttttgagtagtaactaa
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