Oncorhynchus keta (chum salmon): 118396847
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Entry
118396847 CDS
T09424
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118396847
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
118396847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
WD40
Neurobeachin
Motif
Other DBs
NCBI-GeneID:
118396847
NCBI-ProteinID:
XP_052323451
LinkDB
All DBs
Position
18:complement(16664133..17036169)
Genome browser
AA seq
2918 aa
AA seq
DB search
MDTTSERPAVKMPGAVSLSDREIPPARGQQGCSGTGKIMVSGSGSMVLPGGIINPQVPIR
NIKMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEQNFIIAAAESLGCVVELLEHC
DVTCQAEVWSMFTAILRKSVRNLQTSTEVGLIEQLLLKMSSVDDMIADLLVDMLGVLASY
SITVKELKLLFSMLRGDRELWPRHAVKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPI
AKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVGNCLIVTSLKSK
GKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTSDSYDK
CFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGAGYKSTFKFKSESDIHLAE
HHKQVLYDGKLASSISFTYNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHS
IHSAIHSIGGIQVLFPLFSQLDYHQPNDQHNYQNHETQLETTVCATLLVFLVDLLKSSVA
MQEQMLGGKGFLVIGFLLEKSSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHILF
NAAIWIHTPAKVQLSLYTYLSAEFIGTATIYNTIRRIGTVLQLMHSLKYYYWTCNPEASS
GITPKGLDGPRPTQQEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDDNIH
DVLQLVVALMSEHPASMIPAFDQRNGIRVMYKLLASKTESIRVQSLKVLGYFLKHLGHKR
KVEIMHTHSLFTLLGERLMLHTNTVSVTIYNALYEILTEQVCTQVVHKPHPEPDSTIKIQ
NPMILKVVATLLKSSSPSVELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLG
YINPKNPEEQKMMEMVYSLFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAK
MYEDYQRQEEENIKKGRKGLVSTISGLQDLQAGGIQGNMEIREIDSQTQTPESEADYPET
PSHPRNTSSEGKTREEGGLGGTGRTGSGVRVEVHDLLVDIKAEKVEATEVKLDDLDLSPE
PLGVTVGVAGGVVSEDRGGALVQVDSLLDNVYCAAVEKLSSSAASGVLVPNANVAVAPAN
HNTGPLITLADDDKESLPSNSSLMFGQEEPLVLPSPGSNPDPDPDPPFPPGHSHDLGLLD
HMTGSSELGTIGMVGTVTPGGPISSILEEERFKLQTTLGDVTSMPREEACSNGSEFTETG
AGARVEGSGLSEGGEPLAGGKGSGTDAVSNTSDTERSDEGKEVKKIQTTATTQSLHSRTA
AQLERDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSAMHQRLLTDLLLALETD
VHIWRSHSSKSVMDFVNSNENIIFVHNTIHLLSQMVDNIIIACGGILPLLSAATSPSAEL
ENIEATQGMSSETAVSFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCC
VAVRNCLDVRQRQRDRGTNSKSQDNLYGAASANKDPDRLLQDVDINRLRAVVFRDVDDSK
QAQFLALAVVYFISVLMVSKYRDILEPQRETNRMISQSAYSIRHEINSSTSTKTPLAYPD
QSKEPPIPVEELHIERGCLPHTDSGIGEEQMASVLNGADLDASGPGRADAMSSLLGSLSS
GEKHSQESLLEPPGLEVLRTTSSISSISHSNINVRRILKSLVAGPVEGVEPGPEPLPYPD
LAVQRETHSPMLPMQFHSFDRSVVVPVKKPPPGSLAVNTVGHASSSSLATGSTPNIFVAA
SNTPKSMINTTGATDSASSSSTSSSSFVNGATSKNLPAVQPVAPMPEDTVENISITTKLE
RALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSVVELVMLLCSQEWQ
NSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNCAQ
YTADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGSLAQSQLNDFWRLD
YWEDDLRRRRRFVRNPFGSTHLDIPCKMLDDYGSKEDELVKSKKGFHSQTVANQSPETDL
MLDGDDDTASLLQEKEMDNLAGPVVLSTPAQLVAPVIVARGMLSITTTEIYFEVDEDDPS
FKLLDSTVLAYSEGLHGKWMFSEIRAVFSRRYLLQNTGLEVFMANRTSVMFNFPDQATVK
KVVYSLPRVGVGTSYGLPQARRISMATPRQLFKSSNMTQRWQRREISNFEYLMFLNTVAG
RTYNDLNQYAVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEED
QTPPYHYNTHYSTANSTLLWLLRIEPFTTFFLKANNNKFDHPDRTFSAITRSWRHCQRDT
SDVRELIPEFYYLPEMFGNSNGYHLGQREDGKMVCDVELPPWANKPEDFVRINRMALESE
FVSCQLHQWVDLIFGYKQRGPEAVRALNVFHQLTYEGSVSLDSITDPALREAMEKQILIV
GQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLP
HLSVPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDPLIANNSGSNKRQI
TDLVDQSIQINTHCFVVTADNRYILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLAR
SESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSV
CAELGLVISGAKEGPCLVHTITGDLLRALEGPDNCLCPRLISVSSEGHCIICYERGRFCN
FSINGKLLAQMEVNDSTRAIMLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIR
AMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacaagtgagaggccggcggtgaagatgccgggagctgtgtctctttcggac
cgtgaaatccccccggctcgtgggcagcaagggtgctctggtaccgggaaaataatggta
tctggctcgggttctatggttctaccgggcgggataatcaacccgcaggtgcccatccgg
aatatcaagatgaaattcgcggttctgatcggattgatccaggtgggggaggttagcaac
agggatatcgtggagactgtgctcaacctgctggtggggggtgagtttgatctggaacag
aacttcatcatagcggcagcggagagcctgggctgtgtagtagagctgttggagcactgt
gatgtgacctgccaggctgaggtgtggtccatgttcacagccatcctcaggaagagtgtc
cgtaacctccagaccagcactgaggtgggcctcatagagcagctgctgctgaagatgagc
tccgttgacgacatgatcgcagacctgctggtggatatgttaggagtgctggccagctac
agcatcacagtgaaggagctcaaattgctgttcagtatgctgaggggagaccgagaactc
tggccgaggcacgcggtgaagctgctgtctgttctgaaccagatgcctcagagacacggt
ccagacactttcttcaacttccccggacgcagtgctgcggccatagcgctgcctcccatt
gctaagtggccttaccagaacggcttcactctcaacacctggttcagaatggaccctcta
aacaacatcaacgtagacaaagacaaaccatatctctactgctttcgcaccagtaaagga
atcggctactctgcacatttcgtgggcaactgtctgatcgtgacatcgctgaagtctaaa
ggcaaaggcttccagcactgtgtcaaatatgactttcaacctcggaagtggtacatgatc
agcatcgtccatatctacaaccgctggaggaacagtgagatccgttgctacgtcaatggt
cagctggtctcctatggcgacatggcctggcacgtcaacaccagcgatagttatgataag
tgcttcctgggttcgtctgagacagctgatgcgaacagggtattctgtggtcagctgggg
gccatctatgtgttctctgaggctctcaacccagctcagatatttgccattcatcagctg
ggagcgggctataagagtacgtttaagtttaagtcggagagtgacatccacctggcagag
caccataagcaggtcctgtatgatgggaagctggccagctccatctcctttacctacaac
gccaaggctacagacgcccagctctgcctggagtcatcgcccaaggagaacgcctccatc
ttcgtccactcaccccacgcccttatgctacaggatgtgaaggccatagtgacccactcc
atccacagtgccatccactcaataggagggatccaggtgctgtttcctctcttctcccag
ctggactaccatcaacccaacgaccagcacaactaccagaaccatgagacccagctggag
actaccgtctgtgccaccctcctggtgttcctggttgatctgttgaagagctcagtggcg
atgcaggaacagatgctgggagggaaaggattccttgtaatcgggtttctgctggagaag
tcctccagggtccacatcactcgtgcggtcctggagcagttcctgtccttcgctaagtac
ctggatgggttaacccatggagcgccactcctcaaacagctctgtgaccacatcctgttc
aacgcagccatctggatacacacccccgccaaggtccagctctctctgtacacatacctg
tctgcagagtttatcggcacagcaaccatctacaacaccatccgtcgtattgggactgtg
ctgcagctgatgcacagtctgaagtactactactggacctgtaaccctgaggccagcagt
ggcattacacctaaaggactggatggtccaaggcccacccagcaggagatcatctctctc
agggctttcatgttgctgttcctcaaacaactcatcctcaaggaccgaggtgtgaaggaa
gatgagctgcagagtatcctgaactacctgctaaccatgcatgaggatgataatatacat
gatgttcttcagctggtagtggctctgatgtcagaacacccagcctccatgattccagct
ttcgaccagaggaacggcatacgggtgatgtacaagctgctggcctcgaagactgagagc
atcagagtccagtccctcaaagtcctaggatactttctcaaacacctgggacacaaaagg
aaggttgagatcatgcacacacacagtctcttcactctcttgggggagaggctgatgctt
cacactaatactgtgtcagtgaccatctacaacgcgctgtacgagatcctgacagagcag
gtgtgtacccaggtcgtccacaaaccccaccctgaaccagactctacaatcaagatacag
aaccccatgatccttaaggtagtagcgaccctgttgaagagctcgtcccccagtgttgag
ctgatggaggttcgacgtctcttcctctcagacatgatcaaactgttcagcaacagccgc
gaaaaccgacggtgtctgctgcagtgttcagtatggcaggactggatgttcagtctgggc
tatatcaaccctaaaaacccagaggaacagaagatgatggagatggtctatagcctcttc
aggatcctgctctaccatgctatcaagtatgagtggggaggttggagggtctgggtggat
acactctccatcgctcactccaaggtaacatacgaggcccataaggagtacctggctaag
atgtatgaggactaccagcgtcaggaagaggagaacattaagaaggggaggaagggtctg
gtcagcaccatctcaggcctgcaggacctccaggccgggggcatccaggggaacatggag
atcagagagatagactcccagacacagacgccggagagcgaggccgactaccccgagacc
cccagccacccccggaacacatcgtcagaggggaagacaagggaggagggagggctcggg
gggacagggaggacggggtcaggggtcagagtggaggttcatgacctgttggtggacatc
aaggctgaaaaggtggaagccacagaggtgaagctggatgacctggacctgtctccagag
ccgctgggcgtgacagtgggtgtggccggaggtgttgtctctgaggacaggggcggggcg
ttggtccaggtggactccctattggacaacgtttactgtgctgctgtagagaagctaagc
agcagcgccgccagtggtgtactggtccccaacgcaaatgtcgccgtcgcgcctgccaac
cacaacactggtcccctcatcacccttgctgatgacgacaaggaaagtctccctagcaac
agcagcctcatgtttggccaggaagagcccctggtcctgccaagtcctggttctaaccct
gatccagaccctgacccccctttccccccgggccacagccatgacctgggcctgctggac
cacatgactggcagctctgagctggggaccatcggcatggtcggcacggtcactcctggt
ggtccgatcagcagcatcctggaggaggagagatttaagctccagaccaccctgggtgac
gtcacctccatgcccagggaagaggcctgctctaatgggtcagagttcacagagaccggg
gctggagctagggttgaagggtctgggttgtcggaggggggcgagcccttggctggtggg
aaaggtagtgggacagatgcagtcagcaacacctcagatactgagaggtcagacgaagga
aaggaggttaagaagattcagaccactgctactacacagtccctccatagtcgtacggca
gcccagttagagcgtgacctgcgtgtggacctgggcttcagagggatgcccatgacagag
gagcagcggcgccagttcagccctggccctcgcaccaccatgttccgcatcccagagttc
aagtggtcggccatgcaccagcgcctcctcaccgacctgctgttggccctggagacagac
gtccacatctggaggagccattcaagcaaatccgtcatggattttgtcaacagcaatgag
aacatcatctttgtccacaacaccatccacctcctctctcagatggtagacaacatcatc
atcgcctgtggagggatccttcctctgctctctgctgccacctctccttctgctgagttg
gagaacatcgaggcgacccagggcatgtcttcagagacggcggtgtccttcctgtcccgt
ctgatggccatggtggacgttctggtgttcgccagctcactcaacttctctgagatagag
gctgagaagaacatgtcctctggaggcctgatgagacagtgtttacgactggtgtgttgt
gtagcagtgaggaactgtctggatgttagacagagacagagggacagagggaccaacagt
aaaagccaggacaacctgtatggtgcagcatctgccaacaaggaccctgacagacttcta
caggacgtcgatatcaatcgtctgagagctgtcgtgttccgggatgtggatgacagcaag
caggcccagttcttggcactagcggtggtctactttatctctgtcctcatggtgtcaaag
tacagggacatcctggaaccacagagagagaccaacaggatgatcagccaatcagcatac
agcattcgccacgagatcaactcatctaccagcacaaagacccccctggcgtaccctgac
caaagtaaggagccccccatccctgtagaggagctccacatagagagaggctgtctgcca
cacactgactctggcattggagaggaacagatggccagtgtgttaaacggggcagacttg
gacgcttcaggacccgggcgagctgacgccatgtcctccctgctcggcagcctctcctct
ggggagaagcatagccaagagtccctcttggagccgcctggcctggaggtcctaaggacc
acctcctccatctcctccatcagccactcaaacatcaatgtacgaagaatcctgaagagc
ctagtggctgggcctgtagagggggtggaacctggaccagagcccctcccctaccctgat
cttgccgtacagagagagacccattcccccatgctgcccatgcagttccactcctttgat
aggagtgtggtggtcccagtgaagaagcctccaccagggagtctggctgtgaacacggtt
ggacacgcatcctccagcagcctggcaacaggctccacccccaacatctttgttgcagcc
tccaacacccccaagagcatgatcaacaccaccggagctacagactcggcctcctcttcc
tccacctcttcctcatccttcgtcaacggggccaccagtaagaacctgcccgctgtccag
ccggtggcgcccatgcctgaagacacagtggaaaacataagtatcactactaagttggag
cgtgcgctggagaaggtggcccccctgctcagggagatctttgtggactttgcaccgttc
ctctctaggacattgttgggaagccatggtcaggagctgctcatagaaggtttggtgtgt
atgaagtccagcacctccgtagtagaactagtcatgctgctctgctctcaggagtggcag
aactcgatccagaaaaatgccggcctcgccttcatcgagctcatcaacgaggggagattg
ctgtgtcatgctatgaaggaccacatcgtgcgtgttgccaacgaggcagagttcatcctc
aacagacagagagcagaagatgtccataaacacgctgagtttgagtctaactgtgcccag
tacactgctgatcggagggaggaggagaagatgtgtgatcacctgatcagcgctgccaag
cacagagaccatgtgactgccaaccagcttaaacagaagatactcaacatcctcaccaat
aagcatggagcctggggcagcctggcacagagtcagctgaatgacttctggcgtctggat
tactgggaggacgacttacggaggaggcggagattcgtacggaacccctttggctccacc
cacctggacatcccctgcaagatgctggacgactatggcagcaaggaggatgagttggtc
aagtcgaagaaggggttccacagccagacggtagccaatcagagcccagagacggacctg
atgttggatggagacgatgacactgccagtctgctgcaggagaaagagatggacaacctg
gctggcccagtggtcctcagcaccccggcccagctcgtggccccggtaatagtcgcacga
gggatgctctccatcacgacgaccgagatatatttcgaagtggacgaggatgacccctcc
ttcaaactgcttgactccacggtcctggcatactcagagggtctgcatggtaaatggatg
ttcagtgagatcagagcggtcttctccaggcgatacctgctccagaacactggcctggag
gtcttcatggccaacaggacgtcagtgatgtttaacttcccagaccaagccacagtgaag
aaggtggtctacagtctacccagggtcggagtaggaaccagctatggcctaccacaagcc
aggcgtatctccatggcgacgccccggcagctcttcaagtcgtccaacatgacccagcgc
tggcagaggagggagatctccaacttcgagtacctcatgttcctcaacaccgtcgcaggg
aggacctacaatgatctgaaccagtacgccgtgtttccctgggttctcacaaactacgag
tccgaggagctggacctcaccctgccgggcaacttcagagatctctccaagccaattgga
gcattgaacccgaagcgtgcagtgttctatgcagagcgctacgagacatgggaagaggac
cagacccccccatatcactacaacacccactactccaccgctaactccaccctgctctgg
ctgctcaggatagagcctttcaccacgttcttcctgaaagctaacaacaacaagtttgac
catccagaccggaccttctccgccatcacccgctcctggaggcactgccagagagacacc
tcagacgtcagggaattgattccagagttctactacctgccggagatgtttggtaatagt
aatggttaccacctgggccagagggaggatggcaagatggtgtgtgatgtagagctgcct
ccctgggccaacaagcctgaggactttgtcaggatcaaccggatggccctggaaagtgag
tttgtgtcgtgtcagctgcatcagtgggttgaccttattttcggctacaagcagcgcggg
cctgaggcggtgcgcgccctcaatgtctttcaccagctgacctacgagggttccgtcagc
ctggacagcatcactgaccccgccctcagagaggcgatggagaagcagattctgattgtt
ggacagactccgtctcagttgctcatcgagccacatcctcctcgcagctcggccatgcac
ctgtgtttccttccccagagtcctctgatgttcaaggaccagatgcagcaggatgtgatc
atggtgttgaagttcccctccaactccccggtgacacatgtagcagccaacaccctgccc
cacctctctgtccctgccgctgtcaccgtcacctgcagccgactgttcgctgtcaaccgc
tggcacaacactgtcggtttgagaggagcgccaggttactccctggaacaggcccaccac
ctgcccatagagatggaccctctgattgccaacaactctgggagtaacaagcgtcagatc
acagacctggtggatcagagcatccagatcaacacacactgcttcgtggttaccgccgac
aaccgctacatcctggtctgtggcttctgggacaagagtttcagagtctattccaccgag
acaggtaagctgacccagatagtgtttggacactgggacgtggtgacgtgtctggccagg
tcagagagctacatcgggggagactgctacatcgtgtcagggtccagagacgctactctg
ctactgtggtactggagcggacgacaccacatcataggagacaaccccaacaacagtgac
tacccggcaccgcgagctgtgctgaccggccatgaccatgaggtggtgtgtgtctctgtg
tgtgccgagctgggactggtcatcagtggagccaaagagggtccgtgtctggtccacact
ataacaggggacctgctgcgggccctggagggcccagataactgcctgtgtccccgcctc
atatccgtgtccagcgagggccactgtattatctgctacgagagaggacgtttctgtaac
ttcagcatcaatggaaaactactggctcagatggaggtcaacgactcaacacgggccatt
atgctgagtagtgatggtcagaacctggtgacaggaggagacaacggggtagtggaggtg
tggcaggcctgtgacttcaaacaactctacatctacccaggctgtgatgctggtatccgc
gcaatggacctctctcacgaccagaggactctcatcactggcatggcatccggcagcatt
gtggcgttcaacatcgacttcaaccggtggcactacgagcaccagaacagatactga
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integrated database retrieval system