Oncorhynchus keta (chum salmon): 118396861
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Entry
118396861 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118396861
Enzymes [BR:
oke01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
118396861
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118396861
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Radical_SAM
DUF3280
Motif
Other DBs
NCBI-GeneID:
118396861
NCBI-ProteinID:
XP_052324722
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All DBs
Position
18:20323547..20407370
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AA seq
533 aa
AA seq
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MVSESVAERTGYLKVWQNRIYLHTAADVLVGIWFSLKMALKKDGYSIEKVVDVSKAQIFY
GSQTGTAKCSNKLVCMFLLAVYTDGQPTENAEWFCKCLEEASTDFRYGNTYLKGLRYAVF
GLGNSVYGCHYNTVSKNVDKWLWMLSGIRVLSRGDGNCNVANSHNGSVHADFLVWKTKFL
SCLQALVAGQKKACSGNCKMGSSCKTRNRKKPQSSVFSYQAFPEQLSSEKREQSQEDGQI
VELSRLNGMMKADEKEERRELITAALREALTAQGYKVIGSHSGDKRCHWTKSMLRGRGGC
YKHSFYGVEAHRCMESSLSLVCANKCDFCWRLHTNPVGTEWRWKMXPAEKILLEAVENHQ
NMFRHFMVPKAQFPXEIRWSLVPVTKLYVSVGAGTKGSLKKIDRLLFNDFWPRFLDSLKD
LGEKEVSRQRTVYKLTLVKTWTVDKLKAYSELXLGQLDFIEVELKVEGEWWTWIDYERFQ
ELVQAYXGSQTFSAQDHMAKTPYQALFGAQDXGFDPTDTRYQRRHKTKDISGC
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgagagtgtcgcggagagaactgggtatctgaaagtatggcagaacaggata
tacttgcacacagctgccgatgttttggttggaatttggttctcactgaaaatggcattg
aaaaaggatggttacagtattgagaaagtggttgacgtatctaaagcacagatattctat
ggatcacagactggaactgcaaagtgctccaacaagttggtctgtatgttcctattggct
gtgtacactgacggacagcccacagaaaatgctgaatggttctgtaagtgtctggaggag
gcatccactgacttcagatatgggaacacctacctgaaaggactgagatatgcagtgttt
ggcctgggaaactctgtgtatggctgccattacaatacggtgagtaagaatgtggacaag
tggctgtggatgctgagcggcatccgggttctgtccagaggagatggcaactgcaacgta
gcgaatagccacaatggcagcgtgcatgctgactttctggtctggaagaccaagttcctg
agctgcctacaggccctggttgcagggcagaagaaagcctgtagtggaaactgtaagatg
ggcagctcatgtaagaccaggaacaggaagaaaccacagtcatcagtcttctcctatcag
gcatttccagaacagctcagctctgagaagagagagcagagccaggaggatggacagatt
gtggagctgtccaggttgaacggaatgatgaaggctgatgaaaaggaggagaggagagag
ttgatcactgctgccctgagggaggccctgactgctcagggatacaaagtcataggaagt
cactcaggagacaagcgttgtcattggaccaagtccatgctaagaggaagaggaggttgt
tacaagcactccttttatggcgtcgaggcccacaggtgtatggagtcctcccttagcctc
gtctgtgccaacaagtgtgacttctgctggagactccacactaacccggtgggcacagag
tggcgctggaagatgngacctgctgagaagatactactggaggctgtggagaaccaccag
aacatgttccgacacttcatggtccccaaggcacagttcccctaggagatcaggtggagt
ctggtaccggtgaccaagctgtatgtgagtgtgggtgccggcaccaagggcagtctgaaa
aagatcgaccggctgctcttcaatgacttctggccgaggttcctagacagcctcaaggat
ctgggtgaaaaggaagtctctcgacagaggacagtgtacaaactgactctggtgaagacg
tggactgtagacaaactgaaggcctactcagagctcnngctgggacaacttgacttcatt
gaggtcgagttaaaggtggagggagagtggtggacgtggatagactacgagcggttccag
gagcttgtccaggcctatngaggcagccagaccttctctgcccaggaccacatggccaag
accccataccaggccctgtttggtgcccaggattgaggtttcgacccaacagacacacgc
taccagaggagacacaagaccaaagatatctcaggatgctga
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