Oncorhynchus keta (chum salmon): 118397595
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Entry
118397595 CDS
T09424
Name
(RefSeq) survival motor neuron protein-like isoform X1
KO
K13129
survival motor neuron protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118397595
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
118397595
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Ortholog
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GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
Tudor_3
TUDOR
Motif
Other DBs
NCBI-GeneID:
118397595
NCBI-ProteinID:
XP_035648418
EnsemblRapid:
ENSOKEG00005008613
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All DBs
Position
22:complement(40329895..40339498)
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AA seq
383 aa
AA seq
DB search
MAECPASIELRSEGVESSNIEKESVTKLLPNLQKLFESELSESCVPSLETVDSRANSKSD
EKESDEKLADNPQKLSESCVPSKGPFDPKANLKWEIGSHCKAVWSEDGRVYPATLVWLEG
ERCKVKFDNYGNEEEMDLSAMLPEAADQPRKEKWVWMLGSRCRAVYSEDGLVYPAVLVWM
RGERCRVKFEGYGNEEELELSTLLSPDDLGRHCGRATAKAVEGFRSTSNNSADWKKDREW
RTPQQEGHEEPSLPRPPEFPPGKGFNLGNEQGNKKKPSSRKEEPNGRSREPNDHPFPFFP
PVPPPNGSLDFLSLLPPPPPPPCVWPPRAVLADAGDGLGTSVTDLSSMLLSWYLCGYHTG
CYMAMQQTAASHKRAHKEKRAEE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtccagcaagtattgaattgcgaagtgaaggagtcgagagctcaaacatc
gaaaaagagagtgtcacgaagcttctccccaatctacagaaactgtttgagtcagaactg
tctgaatcttgtgtgccaagtctggaaacagttgactcaagggcaaactcaaagagcgat
gaaaaggagagcgatgagaagcttgcagacaatccacagaaactctcagaatcttgtgtg
ccaagtaagggaccgtttgacccaaaggcaaacttaaagtgggagatagggtcccactgc
aaggctgtgtggtcagaggatgggcgggtttatcctgccaccctggtctggttggagggg
gagcgctgcaaggtgaagtttgacaactatggaaacgaggaagagatggacctgagcgcc
atgctacctgaagctgctgaccaaccccggaaggagaaatgggtgtggatgctgggttcc
cggtgccgtgctgtgtactcagaggatggcctggtctacccagcggtgctggtgtggatg
agaggggaacgctgccgggtgaagtttgaaggctacgggaacgaggaggagctggagctg
agcaccctgctatcgccagatgacctgggacggcactgtggaagagctactgccaaggca
gtggaagggttcaggtccactagtaacaacagcgcagactggaagaaggatagagagtgg
aggacacctcaacaagagggacacgaggagccttccttacctcgaccacctgagtttcct
ccaggaaaaggctttaaccttggcaatgagcaggggaataagaagaagccaagtagtcgg
aaagaggaaccaaatggccggagtcgggaaccaaatgatcacccgtttcctttttttcct
ccagtgccaccgcccaatgggtctttggacttcctgtcactcctgcctcctcctccacct
ccaccgtgtgtatggcccccccgagcagtgctggcggatgctggcgatgggcttggcacg
tccgttacagacttatccagcatgctgctctcctggtacctgtgtggctaccacactggc
tgctacatggcaatgcagcagacagcagcaagtcacaagagggctcataaagagaaacgg
gcagaggaataa
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