KEGG   Oncorhynchus keta (chum salmon): 118398788
Entry
118398788         CDS       T09424                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118398788 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118398788 (crnkl1)
   03036 Chromosome and associated proteins [BR:oke03036]
    118398788 (crnkl1)
Spliceosome [BR:oke03041]
 Complex B
  Other components
   Prp19-related factors
    118398788 (crnkl1)
 Complex C
    118398788 (crnkl1)
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     118398788 (crnkl1)
SSDB
Motif
Pfam: HAT TPR_14 Suf TPR_19 TPR_16 U3_assoc_6 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 118398788
NCBI-ProteinID: XP_035650389
EnsemblRapid: ENSOKEG00005021531
LinkDB
Position
19:complement(69926763..69933033)
AA seq 790 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNIAGCRQVFERWTEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRKVFERS
VEFFGEEHVDENLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQF
EIRQKNLQAARQGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFASENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFE
QEFGSDTTRERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQQEEEEEDDEEDDEEDDEEDEEENNGELDRGKVEEVRGKEMEGEENGRGERGID
KEMTEDLASPSSEKPIVSEPVPEKVLKESTYDDRDVSDESSNGSSSSSSSSDNDGGEKQP
RKSNKDSVKD
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcatctactgcggcagggaaacagaggataccgaaagtagcgaaggtgaaaaacaaa
gctcctgcagaggtacaaatcacagctgagcagttgctcagggaggcaaaggagagggag
ctcgagcttctgccaccgccacccaagcaaaagatcactgatgaagaggagttgaacgat
tacaagttgaagaagaggaagggatttgaagacaacatcagaaagaaccgtactgttatc
agcaactggataaaatacgctcaatgggaggagagcctgaaagaagtccagagggctcgc
tctatttacgagcgtgctctggatgtagaccaccgaaatatagctctgtggctgaagtat
gccgagatggagatgaagaaccggcaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcttgccccgtgtcaaccagttctggtacaaatacagttacatggaagaaatg
ctgggcaacatcgctggctgcagacaggtgtttgagcgctggacagagtgggaaccagag
gaacaagcctggcactcttacatcaactttgagctgcgctacaaggaagtcgacaaggcc
cgctccatctatgagagatttgtgattgtccaccctgatgtgaagaattggattaagtac
gcccgttttgaagagaagcatggctacatcgcccatggaaggaaggtgtttgaaagatca
gtggagttctttggcgaggagcatgttgatgagaacctctttgtggccttcgccagattt
gaagagaaacagaaagagtttgagagagttcgagtcatctacaaatacgccctggacaga
attcccaagcagcaggctcaggagcttttcaagttctacactgtgtttgagaagaagttt
ggagaccggaggggaatcgaggacgtcatcgtcagcaagaggagatttcagtatgaagag
gaggtcaaggcaagcccacacaattatgacgcatggtttgattacctacgcctggtggag
agtgacgcggatcctgacactgccagggaggtctatgagagagccatcgccaatatccct
cctatacaggagaagaggcactggagaagatacatttacctgtggataaactacgctcta
tatgaagaactggaggtcaaggacccagagagaacaaggcaggtgtacctggcatgtctg
gatctcatccctcacaaaaagttcacgtttgccaagatgtggctactctacggacagttt
gaaatccgccagaagaacctccaagctgctagacaaggcttgggcacagccattggtaaa
tgtccaaagaacaagctgtttaagggctacattgaactggaactgcagctcagagagttt
gaccgatgtaggaagctttatgagaagtacctggagtttgcctccgagaactgcaccacc
tggatcaagttctctgagctggagaccatcctgggagacacagagagagcccgggccatc
ttcgagctggccatcggacagccacgactggacatgccagaggtgttgtggaagtcctac
atcgactttgaaatcgagcaggaagagtatgacaacaccagaggtctctacaagagactg
ttgcagcgcacacagcacgtcaaggtctggatcagctatgcccagtatgagctgtccata
gatacctctgaccggctgcagaggtgtagggggatctttgaggaggccaacaagggcctg
aggagctgtgaggagaaggaggagcgtctgatgctgctggagtcttggaaggagtttgag
caggagtttggctcagacacaaccagggaaagggtgaagaaactgctgccggagaaggtg
aagaagaggagaaagctcacggcagaggacgggtcagatgcagggtgggaggagtactac
gactacatcttccctgaggatgcagcgaaccagcccaacctcaagctgcttgccatggcc
aagatgtggaagaggcagcaacaagaagaagaagaagaagatgatgaagaagatgatgaa
gaagacgatgaagaggatgaggaagaaaacaatggagaactggataggggtaaagtggaa
gaagtcaggggcaaagaaatggagggagaagaaaacggaagaggggagagaggaatagac
aaagaaatgacagaagatttagcatcaccatcatcagaaaagcctatagtcagtgagcct
gtgcctgaaaaagtcctcaaggagagcacatacgatgacagagatgtttctgatgaaagc
agtaatggaagcagcagcagcagcagcagcagcgacaatgatggtggtgagaaacagcca
aggaagagcaataaggactcagtgaaagattag

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