Oncorhynchus keta (chum salmon): 118399613
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Entry
118399613 CDS
T09424
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118399613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118399613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118399613
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
118399613
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118399613
Exosomal proteins of other body fluids (saliva and urine)
118399613
Exosomal proteins of colorectal cancer cells
118399613
Exosomal proteins of bladder cancer cells
118399613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
118399613
NCBI-ProteinID:
XP_035651736
EnsemblRapid:
ENSOKEG00005039400
LinkDB
All DBs
Position
20:complement(29400067..29412823)
Genome browser
AA seq
223 aa
AA seq
DB search
MFHGIPVAGGMGGAPVNKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VTLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgtcgcaggaggtatgggaggagctcctgtcaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgccagagagagagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacccttcaggccctggagaaagcttacatcaaagac
tgtgtgactcctaatgagtacacggctgcttgctccaggctactggtgcagtacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgacgacttctgtaggaagtac
agacttgactgcccgctagctatggagagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgctgatatcgtatcgctctttatcacggtg
atggacaagctacgtctggaaatccgggcgatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcaccctctggttgaccactctcagcagcatgtcagcctctgatgagctggatgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaacgccttcaatcgcttctta
cactcctcctaa
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