Oncorhynchus keta (chum salmon): 118402747
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Entry
118402747 CDS
T09424
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118402747
03036 Chromosome and associated proteins [BR:
oke03036
]
118402747
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118402747
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Helicases
118402747
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118402747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Gly_acyl_tr_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
118402747
NCBI-ProteinID:
XP_035656845
EnsemblRapid:
ENSOKEG00005008632
LinkDB
All DBs
Position
24:complement(15290742..15298676)
Genome browser
AA seq
787 aa
AA seq
DB search
MLVKALAQHHTVVSFLSVRVPVGLACVHSKGKQPGKMPSKIIFETEDIEMEGEMDISAGS
TTPKKIKEKKTKEGKKIKKQKTVVEEEPDCEPPAPKKKKKKNKEKEDKTNGGAEVDVHSN
AEESPLKDNTSLSNEESADNDKATEKKKKKKKKEKKTDEKVIVNGVLPETPTQIAQSNGH
TAATTPAQSSEDSDSGKETETPEQKEGAFSNFRISPNTIKLLQARGISYLFDIQTQTFNS
VYEGKDVIGQARTGTGKTLAFAIPLIEKLQNDPDDKKRGRAPKILCLAPTRELAIQVSKD
FKDMTKKLSVTCFYGGSSYNPQLDAIRSGIDILVGTPGRIKDHLQNNKLDLSQLKHVVLD
EVDQMLDMGFAEQVEEILSASYQKGSETNPQTLLFSATCPSWVYDVAKRYMRPTYEHVDL
IGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGSHGRTIVFCETKKDANELSMNAS
IKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLDIPEVDLVVQCSPPKDVE
SYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVEQKAGITFKRVGVPTANDIIKSSSKDA
VRFLDSVPPQAIEYFRVSATKLIEERGAVEALSAALAHISGATALEQRSLLNSDTGYTTM
TMNCSQELQNIGCAWRGLKEQLGEEIDNMIRGMTFLKGKMGVCFDVPADKVKEYQDAWQD
GRRWQLSIATELPELEEKPRMGGDRGYGRSFGGQGGGRGFRNGGGGGGGNWRGGGSHKRS
FSSAFDY
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaaaagctctagcgcaacaccacacagtcgtgtcgttcctttctgtacgcgtg
ccggtggggttagcctgtgtccactctaagggaaaacaaccggggaagatgccgtcaaag
attatttttgaaaccgaagacatcgagatggaaggtgaaatggacattagtgcgggcagt
acgacaccaaaaaaaataaaggagaagaagaccaaggagggaaagaaaatcaagaaacag
aaaacggttgttgaagaggaacctgactgtgaacctcctgctcccaagaagaagaagaag
aagaataaggagaaagaggacaaaactaacgggggcgcagaagttgatgttcacagcaac
gcagaagaatcacctttgaaggacaacacatctctttccaatgaggagtctgcagacaat
gacaaagcaaccgagaagaagaagaagaagaagaaaaaggaaaaaaagacagatgaaaag
gtcatcgtcaacggagtgttgcctgagactcccacgcagattgcacaaagtaatgggcat
accgcggcgacaactccagcacaatcaagcgaggactccgacagtggaaaagaaaccgag
acaccagaacagaaagagggagccttctctaacttcagaatctcccccaacaccattaaa
ctacttcaagcaagaggcatatcttacctctttgacatccaaacacaaaccttcaattct
gtgtacgagggaaaggatgtgattggccaggcaagaacaggcactgggaaaactttagct
tttgccattccgctgattgagaaactccaaaatgacccagatgacaagaagaggggcaga
gccccaaagattttatgccttgctccaaccagagaattggctattcaagtatccaaggat
ttcaaggacatgacaaagaaactgtctgttacttgtttctatggtgggagctcctacaac
ccccaacttgatgcgatccgcagtggcatcgatatcctagtgggaactccaggtcgtatc
aaggaccatctacagaataacaaactggacctgtctcaattgaagcacgttgtattggat
gaagtggaccaaatgcttgatatgggctttgcagaacaagtggaggagatactgtctgcg
tcttaccaaaaaggctctgagaccaacccccagaccctgctcttctctgccacatgccca
tcgtgggtgtatgatgtggcaaagaggtacatgaggccaacctatgagcatgtggacctc
attggcaaaaagacccagaaagctgccaccacagtagagcaccttgccatagcgtgtcac
tggtcccagagggctgcagtcattggggatgtggtgcaggtttacagcgggagtcacggc
cgcaccatcgtcttctgtgagaccaagaaggatgccaacgagctgtcaatgaatgcctcc
ataaaacagagttcccagtcacttcatggggacattcctcagaagcagagggagatcaca
ctgaaaggcttcagaagtggcaccttcgaggtcctagtggccaccaacgttgctgcccgc
gggttggacatcccagaggtagacctggtcgtgcagtgctcacccccaaaggatgtggag
tcctacattcaccggtcaggtcgaactggtcgggctggcaggactggcgtctgcatctgt
ttctaccaacgcaaagaggaagaccagcttcgatatgtagagcagaaagcgggcattaca
tttaagcgagttggagtgcccacggccaatgacatcatcaaatcgtccagtaaagacgca
gtgaggtttttagactctgtgcctccccaagccattgagtatttccgcgtgtctgctacc
aagctgattgaggagcgtggggccgtggaggccctgtctgccgccctggcacacatatca
ggagccactgccttggagcagaggtccctcctcaactctgacacgggctacaccacaatg
acaatgaactgctcccaagagctgcaaaacattggctgcgcctggcgtggtctgaaggag
caactgggagaggagattgacaacatgatccgggggatgaccttcctcaagggcaaaatg
ggagtctgttttgatgtcccggctgacaaggtaaaggagtaccaggatgcctggcaggat
ggtagacgttggcagctgtcaatcgccacagagcttcctgagctggaggagaaaccgcgc
atgggtggtgaccgtggatatgggcgatccttcggaggacagggaggtggccgtggcttc
agaaacggcggaggaggcggcggcggcaactggagaggtggaggcagtcataaacgcagc
ttcagcagtgcgtttgattattaa
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