Oncorhynchus keta (chum salmon): 127914356
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Entry
127914356 CDS
T09424
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
127914356
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127914356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127914356
NCBI-ProteinID:
XP_052346103
EnsemblRapid:
ENSOKEG00005008606
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All DBs
Position
31:complement(27713339..27730009)
Genome browser
AA seq
393 aa
AA seq
DB search
MLSTPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEACPGSGDPTLPQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSPAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDDALVPVTSDSQ
ALSVSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQTPLVNGEVS
TPGWKINPVMGAMYAPELYTGEFQFASFPYPVAAPTLAYRGSPLRGRGRAVYNTIRSAAA
VPPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPAAYRVAQSPSAATATYSDGYGRVYAAA
TDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctctctactcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggcctgccccggcagt
ggtgaccccaccctcccccaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacacctgcaggcagacttcctcctctagactatagtcccgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcagggtccgcaacatgaaggggct
gacactctggcagccattagcacggacgatgccctggttccggtgacctctgactcccaa
gctctgagcgtgtcagtgtcatcagggggcggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccacgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtggagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacctttgagagcgcaatggaggcagac
cgagctagggaaaaactgaacggaacgatcgttgaggggaggaaggttgaagtgaacaat
gctacagccaggatagtcaccaagaagccccaaacacctcttgtgaatggtgaggtttca
acccctggatggaagatcaaccctgtcatgggagcgatgtatgcacctgaactctacacc
ggtgagtttcaatttgccagtttcccctaccccgtagctgctcccaccctggcctatcgg
ggctcaccactgcgtgggcggggccgggctgtctacaacacaattcgctcagctgctgca
gtcccacccactgccatgcccgcctaccctggaatgtctcctttcagtgtgctgtaccaa
gatggattatatggagctgaagtctatggcgggtatcctgcagcgtacagagttgcccaa
tcaccatccgctgccacagcaacatacagtgatggatatggccgagtttatgctgctgca
acggatccctaccaccattcagtgggacccacggcaacatacggcgtcggaacaatggcc
agtctgtacagaggaggatacaaccgcttcaccccttactga
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