Oncorhynchus keta (chum salmon): 127923593
Help
Entry
127923593 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
127923593
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127923593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
U-box
zf-C3HC4_3
YscO-like
Fib_alpha
zf-RING_2
zf-RING_6
V_ATPase_I
Y1_Tnp
DASH_Dad3
Exonuc_VII_L
Spc24
Motif
Other DBs
NCBI-GeneID:
127923593
NCBI-ProteinID:
XP_052363559
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAEMVEKLKKTGLQTAPPPALCYAGPGDVVCDVCTGTRKQKALMSCLV
CLASYCETHLQLHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKRLKELQQTVKSFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TENHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDASKTVSELREKLEDFLKGEWTKIS
TTVNIVGVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSEGNRKVTNTGQVRPYPDHP
DRFTNYCQVLCREGLSGRCYWEVERTGDVIVIAVSYKDISRTERGTDGVFGYKNKSWSLH
CSSDGYCFRHNNVVTEVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLY
PGFWLYSYNGTAELVKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcatgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagatggtggagaaactg
aagaagacaggactccagactgctccccctcctgctctgtgctatgctggacctggagat
gtggtgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacttcactatgaatctcctgctttcaag
aagcacaaactggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagaaaagaggctg
aaggagctccaacagactgtgaagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagagaatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgcgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtgggtgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctgaagggaacagaaaggtgaccaacacaggccaagtccgaccatatcctgaccatcca
gacagattcaccaactactgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagaggactggtgatgttattgttatagcagtctcatataaagacatcagc
agaacagagagagggacagatggtgtatttggatacaagaacaagtcctggagtttacat
tgctctagtgatggttattgtttcagacacaataatgttgtgactgaagtatcaggccct
cagtcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagt
gtctctgacacaatgaccctccttcacagagtccagaccacattcactcagccactttat
cctgggttttggctctatagttataatggtactgctgagctggttaaactgtaa
DBGET
integrated database retrieval system
