Oncorhynchus keta (chum salmon): 127927129
Help
Entry
127927129 CDS
T09424
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
127927129
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127927129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-RING_2
U-box
zf-RING_5
Y1_Tnp
Prok-RING_4
Spc24
YscO-like
DUF445
Fib_alpha
LMBR1
NBP1
V_ATPase_I
zf-C2H2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
127927129
NCBI-ProteinID:
XP_052368877
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRICIEGSWDQDDLKGVYSCPQCRET
FTPWPNLRKNNMLAEIVEKLRNTGLQAAPPPALCYAGPGDVVCDFCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCVM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELNELQQAVESFKRSAQSAVEV
SDQIFTELIRSIERSSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQCDEDLILKLHKESQGLQCAPVSSRGH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactattccctgtggacacagttactgtagaatctgtattgag
ggcagctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccatggcctaatctgaggaaaaataacatgttggctgagatagtggagaaactg
aggaatacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aatgagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggtc
agtgatcagatctttactgagctgatccgctccattgagagaagtagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatgtgatgaggacctcatcctcaagctgcacaaagaaagccagggactgcagtgt
gcgccagtctccagcagggggcattaa
DBGET
integrated database retrieval system
