Oncorhynchus kisutch (coho salmon): 109865853
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Entry
109865853 CDS
T09179
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oki01100
Metabolic pathways
Module
oki_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
109865853
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109865853
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
109865853
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
109865853
Glycosyltransferases [BR:
oki01003
]
Glycan extension
O-Glycan
109865853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
109865853
NCBI-ProteinID:
XP_020309920
Ensembl:
ENSOKIG00005019294
LinkDB
All DBs
Position
LG2:complement(40084891..40104408)
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AA seq
763 aa
AA seq
DB search
MRFAMFISLLRPIGPVIIGVSLGFTLSLLSVNWVEETCVLDGKASEEIRLAQDGNSKGAR
RPNSISTVDAEEDFEPRIVPYKPVQQSQTKQLFRAKYISTELGIRQRLFVGIMTSKSTIN
TLGVAVNRTISHHLDTVVFFTGMRNRKVPHGMFVVTHGDERLIWNIFQTIKYILEHYIHE
YDWFYLAQDDTYTEADRIQQLVDHLSIDRELYMGSPEEFIGGEMEGRYCYGGFGYLLSRT
LLLRLKPFLENCRNDILSARPDEWLGRCIIDYANTNCVAEHEGLQYYHYEMGKNSDPSKV
KNVQFNNAFTVHPVSDPEQMYRLHKHFTEIELRRTYDEIEKLQAEIKNVSKVAFDGNRSA
QWPVGINPTFEPKSRFEVIRWDYFTEEQVYSCIDGSPKCELRGIDRLDVADVIERAMGEL
NKKYKPVLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGRSRSITKRVHLVRPLSR
IEIIPMPYVTEATRVHVILPLTFQERGAVNHFLEVFATNLFETSDNAILTLLFIYDPFEA
QQVNQNDIFTSVKAQINAYERKYPAVKILWISVKTETPSQIKFMDIISKKHPVDTLFFIT
NVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDYNPDIAFHNQEPPPTVDLVKDAGHFDRS
SFEEACFYNSDYMVTRTRMASDVQENEEIMETLDIYDMFVRYSTLHVFRAVEPALHQKYH
YQACNPQLSEDIYHRCVQSNLDGLGSRSQLAMLLFEHEQGNST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgcaatgtttatttctctgctgaggccgatcggcccggttattatcggtgtt
tctttgggatttaccttgagtttacttagtgtgaattgggtagaggaaacttgtgtcctc
gacgggaaagcgagtgaagaaatacgtttggcccaagatgggaattcaaaaggagcgagg
agacccaattcgatatcgactgtggatgccgaggaagattttgagccaagaatagtgcca
tataaaccagtccaacaaagccaaacaaagcaactttttcgggctaagtacatcagtaca
gagctggggatccggcagcgcctcttcgtagggatcatgacgtccaaaagcaccatcaac
acattgggagtggccgtgaaccgcaccatcagccaccacctggacactgtggtcttcttc
accggcatgcgcaaccgcaaagtgccccacggcatgttcgtggtcacccatggggacgag
aggctcatatggaacattttccagaccatcaagtacatcttggagcactacatccatgag
tatgactggttctacctggcccaggacgacacctacaccgaggcagaccggatccaacag
ctggtggatcacctgagcatagaccgggagctttacatgggcagccctgaggagtttata
ggtggggagatggaggggaggtactgctacggtgggttcggatacctcctgtcccgtacc
ctgctgctccggctcaaacccttcctggagaactgtaggaatgacatcctgagcgccagg
cctgacgagtggctgggcagatgcatcattgattatgccaacaccaactgtgtggctgag
catgaggggctgcagtactaccattacgagatgggcaagaactctgatccgagtaaggtg
aagaatgtgcagtttaataatgcctttactgtccacccggtatctgaccctgagcagatg
tacagactacacaaacacttcactgaaatcgaacttcggaggacatacgatgagatcgag
aagttgcaggcagagataaagaatgtgagcaaagtggcttttgatggcaaccggagcgcc
cagtggcccgttgggatcaatcctacgtttgagccgaagtcccgttttgaggtcatccga
tgggactacttcacagaggagcaggtctattcatgcattgacggctcccccaagtgtgaa
ctgcgtggcattgatcggttggacgtggccgacgtcatcgagagagccatgggggagctg
aacaagaagtacaagcctgtcctccacctgaagaagcagcagctgatcaacggctaccgc
cgcttcgaccccactcggggcatggagtacaccctggacctgcagctggaggtggtcaac
cagaagggccgcagtcgctccatcaccaagagggtccacctggtgcgtcccctgagtcgc
attgagatcatccccatgccttacgtcacagaggccaccagggttcacgtcatcttgccg
ttgacttttcaggaacggggtgccgtcaaccattttctagaagtgtttgccacaaatttg
tttgagaccagtgacaacgccatcttgactttactgtttatctacgacccattcgaggcc
cagcaggtcaaccagaatgacatattcaccagtgttaaagcgcagatcaatgcatacgaa
cgcaagtatccggcagtgaagatcctgtggataagtgtcaagacagaaaccccttctcaa
atcaagttcatggacataatttccaagaagcacccagtagacacgctgttcttcatcacc
aacgtcaacaccaacgtcaactccgagttcctcaaccgttgccgcatgaactccatcaac
aactggcaggtattcttcccgatccacttccaggactacaacccagacattgccttccac
aaccaggagcccccacccacagtagacctggtcaaggacgccggacactttgaccgcagt
tctttcgaggaggcgtgcttctacaactccgactacatggtgacgcgcacgcgcatggcc
tccgacgtgcaggagaatgaggagatcatggagaccttggatatctacgacatgtttgtc
aggtactccaccctgcatgtgttcagggctgtggagccggctctgcaccagaagtaccac
taccaggcctgtaacccgcagctcagtgaggacatctaccacaggtgtgtccagagcaac
ctggatggcctgggatcacgttcccagctcgccatgctgttatttgaacacgagcaagga
aatagcacttga
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integrated database retrieval system
