Oncorhynchus kisutch (coho salmon): 109865961
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Entry
109865961 CDS
T09179
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109865961
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109865961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
109865961
NCBI-ProteinID:
XP_031655558
Ensembl:
ENSOKIG00005044336
LinkDB
All DBs
Position
LG20:46229645..46393430
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AA seq
1288 aa
AA seq
DB search
MERGVRLCPIWHTSVFWFLLLIMLSFFLAAKSEITCRSCQPGDKGRIKELLLKTDTREFA
TGHGGEVIGNGDGTTASRSLNSASAETQQLDCAARSDECIQGKNIYSRRKRNTDILLRSK
NALLDGGMQYGGGKQRKFTPRGEYKVSNLKMNRHVGNTDVGKARADLIPGVSHEHRVRRD
SPGANIGDVKVKSSGLPQRRETLPQSYSREGITSRTGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKMTDSVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGREWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYDRRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGIIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIENGVKHVYKAVGIYRVTATGENR
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKAIAVHEYFRSHLLAFSSNLDDHNPDV
AEWRLDVSRVIKNSMVKATGVTPERLLVSVLPGLPTAAEFFLLPDKELTEGKPDKNSAHL
DQLTEIILSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDMSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIQSPVSPTESTLVSPNTPRELVTSPELMDT
ELNTRPIGCIKSHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattatgccctatttggcacaccagcgttttctggtttctgctt
ttgataatgctatctttctttctagccgctaaatcagagataacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggcacggaggggaagttattggaaatggagacgggacaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagctagatccgatgaatgcatc
caggggaaaaacatatactcaaggcgaaaacggaatactgacatactgctccgttccaag
aacgcactactcgatggaggaatgcaatacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccgtcatgtaggcaatacagatgtc
gggaaggctcgcgcagatttaattcccggcgtctcacacgagcaccgagttcgtagggac
agcccgggagctaatattggggatgttaaagtgaagtcctccggtttaccccagagaagg
gagacactgcctcagagttactcgcgagagggcatcacctcacggactgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacagaagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgcattgaccggagattcctctcacaaccaa
gccatggtgcactggtctgggcaaaacagcagtgtgattctcatgctgaccaagctgttt
gacttcaacctgaacagtgtcacagagagctcgttgtggaggtcaaccgactacggaacc
acttaccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtacaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccaatctactatgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaagtacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaacgtcatgatagacctgtatgaggtggcgggtata
aaagggatgttcctcgccaacaagatgacggacagcgtggtgaagacttacatcacctac
aacagagggagagactggaggctcctgcaggctcccactgctgacctgaggggcaacagc
atccgctgtgaactaccatactgttccctacacctccacctacatgtgtcggccaacccc
tacacgtcggggaatatcgagagcaaggactctgcccctgggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagagagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggttg
ctaggggagccgggggaggagactctcattatgacgatctttggccacgtcagtcaccgg
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaaccggggcgaaccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacatactcggtc
acgatgacctcggcaccctgcgactgcacagaggccgactttgagtgtgactatggctac
gataggcggagtgatggcaagtgcacccctgccttttggttcctcccatcgtccatgtct
agaagctgcaccacagggactactttcatcaacagcactggctacaggaaggtggtgtcc
aataactgcacagcgggaatcatagcagagtacacggccaggaggcagcactgtcctacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggtgacggagccaggacgagcatcatg
gtggacttcggggacggtcacgctctgacctactccaacgtgagctccatagagaatggg
gtcaagcatgtctacaaggctgtcgggatctaccgtgtgaccgctacaggagagaacagg
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcggtgaagagtaaggaagtcaacctcactgctgtgctgtgg
ccgagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaacgccatcctacaggaccggaaagccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgacgtg
gccgaatggagactagacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgacaccggaacggctccttgtcagtgtcctaccagggttgcccacggcagcagagttt
ttcctcctaccagacaaagagttaacggagggaaagccggataagaactcagctcattta
gaccagctcactgaaatcatacttagcgccctcaaccaaaacctggtccagttcaccctt
cgtcctggggtccaggtcacagtatatgctgcacatttgtcagcagcgcccctagtggac
atgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatccagagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgagggagctggtgacttctccggagcttatggacaca
gagttgaacacacggcccatcggatgcatcaagtctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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