Oncorhynchus kisutch (coho salmon): 109867008
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Entry
109867008 CDS
T09179
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109867008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109867008
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109867008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
109867008
NCBI-ProteinID:
XP_031657802
Ensembl:
ENSOKIG00005018183
LinkDB
All DBs
Position
LG22:complement(41203316..41222094)
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AA seq
846 aa
AA seq
DB search
MPKQQQQNRDLELDRLVRQVPLQHHPPTRSPSLSSPNSTLEMPNVPSYPRLPPISLSRQL
SGLFNPTFHIEDDPTSALPSVSSRLSVHPAVSVEDVDSGGEGGGGGGEHHRHHIPQILTL
QDSNFKTLTVPGVSKTSRQSKVAEKEKKLYSQSEEDEEEMEIAVRAWPSQSSILSGDDGL
KERPASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPTASPARAPTPPP
APPEEPKEEEIEEQQPRLCCKVMPPRWIRALLHYRFPASIDPFTNLVYVLWLFFVTLAWN
WNMWLIPVRWAFPYQTPSNIYLWLVTDYLCDLIYILDILVFQPRLQFVRSGDIVFDKKDM
RVNYMKTFRFKMDVMSLVPLELFYFKTGINPLLRFPRLLKIMSFFEFNDRLEGILTKAYV
YRVIRTTTYLLYCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIRCYYFAVKTLITIGG
LPDPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRACMDNTVKYMASYR
IPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCDR
QMIFDMLKRLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVF
GEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKARKMLTKDK
KPPKEPAQVIPPRTVTPKLFKAALDVAHQKTGLKGTLAKIKEKINKSSVSLQPSMSSSLP
PLSPVSPVSSLDPERKADAMSPTLDSSTLLCPVSHCHRDETLSKEQGQVEGEVAGESGKK
KEKRKA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcagcagcagcaaaaccgggacctggagttggaccgcctggtccgccaggtc
cctctccaacaccaccctccgactcgcagcccctcactgtcctcccccaacagtacccta
gagatgcccaacgtgccctcctacccccgcctgccacccattagcctgtccaggcagctg
tcagggcttttcaaccccaccttccacatcgaggacgaccccacgtccgctctaccctca
gtgagctccaggctcagtgtgcacccagctgtcagtgtggaggatgtggattccggcgga
gagggaggagggggcggaggggagcaccaccgccaccacattccccaaatccttacccta
caggactccaacttcaagaccctgaccgtacccggagtgtccaaaaccagccgtcagagt
aaagttgctgaaaaagaaaagaagttgtactctcagagtgaggaggatgaagaggagatg
gagatcgcagtgagggcatggcctagccagtccagcatccttagtggagacgatgggcta
aaggagcgccctgcatcttccgctagccaggccagctacgtggtgaatgagcgcctacag
gaactggtcaagatgtttaaggagaggacagaaagggccaaagagaaactcatagaccca
gatcactctgatgatgacagtccaactgcctcccctgcgagagctccaacaccacctcct
gcgcctccagaggagccgaaggaggaggagatagaggagcagcaacccagattatgctgc
aaggtgatgcctcctcgctggatcagagctctgctgcactaccgcttccccgctagcatc
gaccccttcaccaatctggtctatgtgctgtggctgtttttcgtcaccttggcgtggaac
tggaacatgtggcttatcccggtgcgctgggccttcccctaccagacacccagtaacatc
tacctgtggctagtcactgactatctctgtgacctcatctacatcctggacatcctggtc
ttccagccccgcctgcagtttgtccgcagtggagacatagtgtttgacaaaaaggacatg
agagtgaattacatgaaaaccttccggttcaagatggatgtcatgagtcttgttccactg
gagttgttctattttaaaactgggatcaacccactcctccgcttcccacgactactaaaa
ataatgtctttctttgagttcaacgaccgtcttgagggcatccttaccaaagcctacgtt
tacagagtgatccggaccaccacctacctgctgtactgcctgcactgtaatgcctgtctg
tactactggggctctgcgtatgaaggtctgggctccacgcagtgggtctatgacggacag
ggcaacagttacatccgctgctactactttgctgtgaagaccctaatcaccattggtgga
ctgccggaccccacaacgctctttgaaatcatctttcagctcataaactactttgttgga
gtgtttgccttttccatcatgattggacagatgagagatgtggttggtgcagccacagca
ggacagacgtactacagagcatgcatggacaacactgtcaaatacatggcctcctaccgt
atccctaaagacgtgcagaaccgggttaaaacctggtacaactacacctggcagtcccag
ggcatgctggatgaacaggagcttctggttcagctcccagacaagatgaggctggacatc
gctgtggatgtcaactatgacattgtcagtaaagtgtctctcttccagggttgcgataga
cagatgatatttgacatgctgaagagactgaggtctgttgtttacctcccaggggactat
gtctgcaaaaagggtgaagttgggcgggaaatgtacatcatcaaagccggagaggtgcag
gtggtgggcgggccagatgggaagactgtgtttgtcacactgagggcgggatcagtgttt
ggggaaatcagcttgctggcagttggtggagggaacaggagaacagcaaacgtggtggct
catggcttcgccaacctgttcatcctggacaagaaggacctcaatgagattctagtgcat
taccccgagtcccagaagctgctccgcaagaaggccaggaagatgctcactaaagataag
aagcctccgaaggagccggcccaggtgatccctcctcgaacagtcacgcccaagctattc
aaagctgctctggatgtggcgcatcagaaaacaggcctcaaagggaccctcgccaagatt
aaggagaagatcaacaaatccagcgtttctctacagccctccatgtcctcctccctgcct
cccttgtccccagtctctccagtctccagtctggacccagagcgcaaggctgacgccatg
tcaccaaccttagacagctccacgctgctctgccccgtctcccattgtcacagagatgag
acactctccaaggagcagggccaagtggagggagaagttgcaggagagagtgggaagaag
aaagaaaagagaaaggcatga
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